RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MAST2Q6P0Q8 1798 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 CYP7A1P22680 504 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 VEGFBP49765 207 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 NFIAQ12857 509 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 SUPT20HL1Q3ZLR7 823 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 ARMC9Q7Z3E5 817 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 MAGEB6Q8N7X4 407 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
RFX3-210ENST00000457373 GPATCH3Q96I76 525 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 PAG1Q9NWQ8 432 aa12.25□□□□□ -0.45
RFX3-210ENST00000457373 AATFQ9NY61 560 aaKnown RBP eCLIP12.25□□□□□ -0.45
RFX3-210ENST00000457373 ANGEL1Q9UNK9 670 aaKnown RBP12.25□□□□□ -0.45
RFX3-210ENST00000457373 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
RFX3-210ENST00000457373 PPP1R12BO60237 982 aaPredicted RBP12.24□□□□□ -0.45
RFX3-210ENST00000457373 DYNLL1P63167 89 aaKnown RBP12.24□□□□□ -0.45
RFX3-210ENST00000457373 FKBP1BP68106 108 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 PICALMQ13492 652 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 RGMBQ6NW40 437 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 ADGRA1Q86SQ6 560 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 FAM83AQ86UY5 434 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 FAM151AQ8WW52 585 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 TEPSINQ96N21 525 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 HAUS7Q99871 368 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
RFX3-210ENST00000457373 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
RFX3-210ENST00000457373 IGSF3O75054 1194 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 BAG3O95817 575 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 MAP4K4O95819 1239 aaPredicted RBP12.23□□□□□ -0.45
RFX3-210ENST00000457373 ECE1P42892 770 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 RGS3P49796 1198 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 ZNF157P51786 506 aaPredicted RBP12.23□□□□□ -0.45
RFX3-210ENST00000457373 RHBDL3P58872 404 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 TEX11Q8IYF3 940 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 SH3RF3Q8TEJ3 882 aaPredicted RBP12.23□□□□□ -0.45
RFX3-210ENST00000457373 IDI2Q9BXS1 227 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
RFX3-210ENST00000457373 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 TTC41PQ6P2S7 1318 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 MYH7P12883 1935 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 ERC2O15083 957 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 USP2O75604 605 aaPredicted RBP12.22□□□□□ -0.45
RFX3-210ENST00000457373 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
RFX3-210ENST00000457373 MX1P20591 662 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 E2F4Q16254 413 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 SLC9C2Q5TAH2 1124 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 ZSCAN29Q8IWY8 852 aaPredicted RBP12.22□□□□□ -0.45
RFX3-210ENST00000457373 MIGA1Q8NAN2 632 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 HHIPL1Q96JK4 782 aa12.22□□□□□ -0.45
RFX3-210ENST00000457373 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
RFX3-210ENST00000457373 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 AOC2O75106 756 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 ENTPD3O75355 529 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 CENPBP07199 599 aaPredicted RBP12.21□□□□□ -0.45
RFX3-210ENST00000457373 PDE6AP16499 860 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
RFX3-210ENST00000457373 PPP4CP60510 307 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 SLFNL1Q499Z3 407 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
RFX3-210ENST00000457373 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
RFX3-210ENST00000457373 DDTLA6NHG4 134 aaPredicted RBP12.2□□□□□ -0.46
RFX3-210ENST00000457373 GLRX3O76003 335 aaKnown RBP12.2□□□□□ -0.46
RFX3-210ENST00000457373 PLCG2P16885 1265 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 ADD2P35612 726 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 NUCB1Q02818 461 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 JMYQ8N9B5 988 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
RFX3-210ENST00000457373 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.2□□□□□ -0.46
RFX3-210ENST00000457373 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
RFX3-210ENST00000457373 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 CHGBP05060 677 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 PDE1AP54750 535 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
RFX3-210ENST00000457373 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 DCAF15Q66K64 600 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 RASAL3Q86YV0 1011 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 SLC10A4Q96EP9 437 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 ZIC5Q96T25 663 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
RFX3-210ENST00000457373 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
RFX3-210ENST00000457373 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
RFX3-210ENST00000457373 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms