RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 PDCP20941 246 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
PKP4-206ENST00000452162 EPHX2P34913 555 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 STK3Q13188 491 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 LARP1BQ659C4 914 aaKnown RBP12.63□□□□□ -0.39
PKP4-206ENST00000452162 DPF2Q92785 391 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 BRF1Q92994 677 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.394e-6■□□□□ 11.2
PKP4-206ENST00000452162 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
PKP4-206ENST00000452162 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
PKP4-206ENST00000452162 ADD2P35612 726 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
PKP4-206ENST00000452162 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 CERS5Q8N5B7 392 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
PKP4-206ENST00000452162 MYO5AQ9Y4I1 1855 aaKnown RBP12.62□□□□□ -0.39
PKP4-206ENST00000452162 POLR2AP24928 1970 aaKnown RBP12.62□□□□□ -0.39
PKP4-206ENST00000452162 PFKFB2O60825 505 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 RPS12P25398 132 aaKnown RBP12.62□□□□□ -0.39
PKP4-206ENST00000452162 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
PKP4-206ENST00000452162 ZSCAN25Q6NSZ9 544 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 AGBL3Q8NEM8 1001 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 DOCK2Q92608 1830 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
PKP4-206ENST00000452162 COL1A1P02452 1464 aaPredicted RBP12.62□□□□□ -0.39
PKP4-206ENST00000452162 GPAA1O43292 621 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 JAK2O60674 1132 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 EGFRP00533 1210 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
PKP4-206ENST00000452162 UBE3CQ15386 1083 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
PKP4-206ENST00000452162 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 KIAA0825Q8IV33 1275 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 SYCE3A1L190 88 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 H7C1D1 291 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 FGAP02671 866 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 SCRN1Q12765 414 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 MFSD14BQ5SR56 506 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
PKP4-206ENST00000452162 LLPHQ9BRT6 129 aaKnown RBP12.61□□□□□ -0.39
PKP4-206ENST00000452162 FIBPO43427 364 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 NASPP49321 788 aaPredicted RBP12.6□□□□□ -0.39
PKP4-206ENST00000452162 UBE2HP62256 183 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 GRIK5Q16478 980 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
PKP4-206ENST00000452162 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
PKP4-206ENST00000452162 RBSNQ9H1K0 784 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
PKP4-206ENST00000452162 GNL3LQ9NVN8 582 aaKnown RBP12.6□□□□□ -0.39
PKP4-206ENST00000452162 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
PKP4-206ENST00000452162 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 TOMM70O94826 608 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 PDE6AP16499 860 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 FGD1P98174 961 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 TBC1D10BQ4KMP7 808 aaPredicted RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 RBM26Q5T8P6 1007 aaKnown RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 EVCP57679 992 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 SPATA5Q8NB90 893 aa12.59□□□□□ -0.39
PKP4-206ENST00000452162 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
PKP4-206ENST00000452162 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.39
PKP4-206ENST00000452162 IDH1O75874 414 aaKnown RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 HAND2P61296 217 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
PKP4-206ENST00000452162 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 FERMT3Q86UX7 667 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
PKP4-206ENST00000452162 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 SEMA3EO15041 775 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
PKP4-206ENST00000452162 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
PKP4-206ENST00000452162 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 PDIA3P30101 505 aaKnown RBP12.57□□□□□ -0.4
PKP4-206ENST00000452162 KRT85P78386 507 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms