RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 FAM217BQ9NTX9 383 aaPredicted RBP14.03□□□□□ -0.16
COL27A1-202ENST00000451716 RTEL1Q9NZ71 1219 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 GOLGA8AA7E2F4 631 aa14.02□□□□□ -0.16
COL27A1-202ENST00000451716 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
COL27A1-202ENST00000451716 TOM1O60784 492 aa14.02□□□□□ -0.16
COL27A1-202ENST00000451716 KINO60870 393 aaKnown RBP14.02□□□□□ -0.16
COL27A1-202ENST00000451716 VPS37DQ86XT2 251 aa14.02□□□□□ -0.16
COL27A1-202ENST00000451716 CMTR1Q8N1G2 835 aaKnown RBP14.02□□□□□ -0.16
COL27A1-202ENST00000451716 ENGASEQ8NFI3 743 aa14.02□□□□□ -0.16
COL27A1-202ENST00000451716 MINPP1Q9UNW1 487 aa14.02□□□□□ -0.16
COL27A1-202ENST00000451716 RTL9Q8NET4 1388 aa14.02□□□□□ -0.17
COL27A1-202ENST00000451716 NDUFA8P51970 172 aa14.02□□□□□ -0.17
COL27A1-202ENST00000451716 FAM160A1Q05DH4 1040 aa14.02□□□□□ -0.17
COL27A1-202ENST00000451716 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-202ENST00000451716 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
COL27A1-202ENST00000451716 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
COL27A1-202ENST00000451716 SRCAPQ6ZRS2 3230 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 MARCKSP29966 332 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 ATL3Q6DD88 541 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 SYNE3Q6ZMZ3 975 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 SLC51AQ86UW1 340 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 NACAP1Q9BZK3 213 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 GNPATO15228 680 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 DYNLL1P63167 89 aaKnown RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 NTRK3Q16288 839 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 KRT40Q6A162 431 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 SLC26A6Q9BXS9 759 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 CYP2D7A0A087X1C5 515 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-202ENST00000451716 TFCP2L1Q9NZI6 479 aa14.01□□□□□ -0.17
COL27A1-202ENST00000451716 COL1A1P02452 1464 aaPredicted RBP14□□□□□ -0.17
COL27A1-202ENST00000451716 BCL9LQ86UU0 1499 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 UBAP1LF5GYI3 381 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 SPTLC2O15270 562 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 GUCY1A2P33402 732 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 ADALQ6DHV7 355 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 ZBTB9Q96C00 473 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
COL27A1-202ENST00000451716 TRIM5Q9C035 493 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 GTF3C5Q9Y5Q8 519 aaPredicted RBP14□□□□□ -0.17
COL27A1-202ENST00000451716 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
COL27A1-202ENST00000451716 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 FMR1NBQ8N0W7 255 aaPredicted RBP14□□□□□ -0.17
COL27A1-202ENST00000451716 SDF4Q9BRK5 362 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 KCNF1Q9H3M0 494 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 RREB1Q92766 1687 aa14□□□□□ -0.17
COL27A1-202ENST00000451716 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 MAGEB6P1A0A0J9YX57 407 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 GRIPAP1Q4V328 841 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 ANO1Q5XXA6 986 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
COL27A1-202ENST00000451716 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 NBPF5PQ86XG9 351 aaPredicted RBP13.99□□□□□ -0.17
COL27A1-202ENST00000451716 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 ZNF622Q969S3 477 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL27A1-202ENST00000451716 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 NRBP1Q9UHY1 535 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 C4AP0C0L4 1744 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 C4BP0C0L5 1744 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 ZNF804BA4D1E1 1349 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 CDKL5O76039 1030 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 TERF1P54274 439 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 EVX2Q03828 476 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 PPARAQ07869 468 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 VPS72Q15906 364 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 NUP133Q8WUM0 1156 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 KRT23Q9C075 422 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
COL27A1-202ENST00000451716 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
COL27A1-202ENST00000451716 PRDM1O75626 825 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 WDHD1O75717 1129 aaPredicted RBP13.98□□□□□ -0.17
COL27A1-202ENST00000451716 GNAT2P19087 354 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 LIFRP42702 1097 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 UBE4AQ14139 1066 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 STAG1Q8WVM7 1258 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 ZPR1O75312 459 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 PTGS1P23219 599 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 WTAPQ15007 396 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
COL27A1-202ENST00000451716 PYCARDQ9ULZ3 195 aa13.98□□□□□ -0.17
COL27A1-202ENST00000451716 YEATS4O95619 227 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 RPS8P62241 208 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms