RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 ZBTB38Q8NAP3 1195 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 FAN1Q9Y2M0 1017 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 MAP2K7O14733 419 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 HNRNPH1P31943 449 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 IMPACTQ9P2X3 320 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 AKAP2Q9Y2D5 859 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 LAMB2P55268 1798 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 LAMA4Q16363 1823 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 ARAP2Q8WZ64 1704 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 LARGE1O95461 756 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 RBM28Q9NW13 759 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
SYNGAP1-204ENST00000449372 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 BIRC2Q13490 618 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 GIMAP7Q8NHV1 300 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 KAT2BQ92831 832 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 ZBTB1Q9Y2K1 713 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 AKAP11Q9UKA4 1901 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 JAKMIP3Q5VZ66 844 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 SDF4Q9BRK5 362 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 FAM107BQ9H098 131 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.05
SYNGAP1-204ENST00000449372 CCDC151A5D8V7 595 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 TAF5LO75529 589 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 EIF3JO75822 258 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 KCNJ6P48051 423 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 ARMCX5Q6P1M9 558 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 CDC37L1Q7L3B6 337 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 N4BP1O75113 896 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 CHGBP05060 677 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 LIG3P49916 1009 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 TRIM65Q6PJ69 517 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 BARGINQ6ZT62 677 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 MARCH10Q8NA82 808 aaPredicted RBP15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 KIF6Q6ZMV9 814 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
SYNGAP1-204ENST00000449372 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 INTS5Q6P9B9 1019 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 CASZ1Q86V15 1759 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 ERVV-1B6SEH8 477 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 IL6STP40189 918 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 PPP2R3AQ06190 1150 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 TMC6Q7Z403 805 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 FAM177A1Q8N128 213 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 FAM89AQ96GI7 184 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 SETQ01105 290 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 HDXQ7Z353 690 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 FANCGO15287 622 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 CPA1P15085 419 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 TIMM10P62072 90 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 BRD3Q15059 726 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 BRF1Q92994 677 aa15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-204ENST00000449372 MYH7P12883 1935 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 PHACTR2O75167 634 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 FBXW10Q5XX13 1052 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 RSRC2Q7L4I2 434 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 DHX40Q8IX18 779 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 STK3Q13188 491 aa15.36■□□□□ 0.05
SYNGAP1-204ENST00000449372 TXLNAP40222 546 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 ME1P48163 572 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 FAM160A1Q05DH4 1040 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 AOPEPQ8N6M6 819 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms