RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 ATP6V0A2Q9Y487 856 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 PPFIA3O75145 1194 aa20.75■□□□□ 0.91
LMNA-208ENST00000448611 NPR1P16066 1061 aa20.75■□□□□ 0.91
LMNA-208ENST00000448611 UBE2HP62256 183 aa20.75■□□□□ 0.91
LMNA-208ENST00000448611 KRT85P78386 507 aa20.75■□□□□ 0.91
LMNA-208ENST00000448611 CTR9Q6PD62 1173 aa20.75■□□□□ 0.91
LMNA-208ENST00000448611 CRNKL1Q9BZJ0 848 aaKnown RBP20.75■□□□□ 0.91
LMNA-208ENST00000448611 ZSCAN16Q9H4T2 348 aaPredicted RBP20.75■□□□□ 0.91
LMNA-208ENST00000448611 SMIM22K7EJ46 135 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 IFIT3O14879 490 aaKnown RBP20.74■□□□□ 0.91
LMNA-208ENST00000448611 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
LMNA-208ENST00000448611 DUOX1Q9NRD9 1551 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 PDE6BP35913 854 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 METAP2P50579 478 aaKnown RBP eCLIP20.74■□□□□ 0.911e-9■□□□□ 10.9
LMNA-208ENST00000448611 GRIK5Q16478 980 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 DCP1AQ9NPI6 582 aaPredicted RBP20.74■□□□□ 0.91
LMNA-208ENST00000448611 TOMM22Q9NS69 142 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 ATP8A2Q9NTI2 1148 aa20.74■□□□□ 0.91
LMNA-208ENST00000448611 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
LMNA-208ENST00000448611 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 CPLX1O14810 134 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 FGRP09769 529 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 MRE11P49959 708 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 NFXL1Q6ZNB6 911 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 STK11IPQ8N1F8 1099 aa20.73■□□□□ 0.91
LMNA-208ENST00000448611 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
LMNA-208ENST00000448611 ZBTB43O43298 467 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 XRCC6P12956 609 aaKnown RBP eCLIP20.72■□□□□ 0.91
LMNA-208ENST00000448611 ELP1O95163 1332 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 USP17L12C9JPN9 530 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 USP17L21D6R901 530 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 C6orf229H3BNL8 230 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 PCP11498 1178 aaKnown RBP20.72■□□□□ 0.91
LMNA-208ENST00000448611 FOSBP53539 338 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 GSTO1P78417 241 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 SART3Q15020 963 aaKnown RBP20.72■□□□□ 0.91
LMNA-208ENST00000448611 TTC6Q86TZ1 520 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 ESR2Q92731 530 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 GRPEL1Q9HAV7 217 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 NID2Q14112 1375 aa20.72■□□□□ 0.91
LMNA-208ENST00000448611 RXRAP19793 462 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 ALDH1B1P30837 517 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 ADD1P35611 737 aaKnown RBP20.71■□□□□ 0.91
LMNA-208ENST00000448611 MICU3Q86XE3 530 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 ZKSCAN3Q9BRR0 538 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 SCAND2PQ9GZW5 306 aaPredicted RBP20.71■□□□□ 0.91
LMNA-208ENST00000448611 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
LMNA-208ENST00000448611 ORC3Q9UBD5 711 aaPredicted RBP20.71■□□□□ 0.91
LMNA-208ENST00000448611 SLC12A7Q9Y666 1083 aa20.71■□□□□ 0.91
LMNA-208ENST00000448611 CCDC69A6NI79 296 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 ZBTB7AO95365 584 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 CDC27P30260 824 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 DIXDC1Q155Q3 683 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 SBK1Q52WX2 424 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 MASTLQ96GX5 879 aa20.7■□□□□ 0.91
LMNA-208ENST00000448611 PPP4CP60510 307 aa20.7■□□□□ 0.9
LMNA-208ENST00000448611 WTAPQ15007 396 aa20.7■□□□□ 0.9
LMNA-208ENST00000448611 SYAP1Q96A49 352 aaPredicted RBP20.7■□□□□ 0.9
LMNA-208ENST00000448611 MYL10Q9BUA6 226 aa20.7■□□□□ 0.9
LMNA-208ENST00000448611 ARPP21Q9UBL0 812 aaPredicted RBP20.7■□□□□ 0.9
LMNA-208ENST00000448611 MKRN1Q9UHC7 482 aaKnown RBP20.7■□□□□ 0.9
LMNA-208ENST00000448611 LAMB1P07942 1786 aa20.7■□□□□ 0.9
LMNA-208ENST00000448611 ERICH2A1L162 156 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 GOLGA8AA7E2F4 631 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 CDKL5O76039 1030 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 SEC23AQ15436 765 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 NTRK3Q16288 839 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 TMTC2Q8N394 836 aa20.69■□□□□ 0.9
LMNA-208ENST00000448611 TFIP11Q9UBB9 837 aaKnown RBP20.69■□□□□ 0.9
LMNA-208ENST00000448611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
LMNA-208ENST00000448611 LDHCP07864 332 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 EVX2Q03828 476 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 RGS22Q8NE09 1264 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 UBAC1Q9BSL1 405 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 FAM205AQ6ZU69 1335 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 GUCY1B3Q02153 619 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 OLFM4Q6UX06 510 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 CCDC144CPQ8IYA2 1237 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 MPNDQ8N594 471 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 FBXO18Q8NFZ0 1043 aa20.68■□□□□ 0.9
LMNA-208ENST00000448611 SH3RF3Q8TEJ3 882 aaPredicted RBP20.68■□□□□ 0.9
LMNA-208ENST00000448611 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
LMNA-208ENST00000448611 RTFDC1Q9BY42 306 aaPredicted RBP20.68■□□□□ 0.9
LMNA-208ENST00000448611 SYCE3A1L190 88 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 ORC4O43929 436 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 BAG3O95817 575 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 RCAN1P53805 252 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 MFSD14BQ5SR56 506 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 CPLX2Q6PUV4 134 aaKnown RBP20.67■□□□□ 0.9
LMNA-208ENST00000448611 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 TBC1D22AQ8WUA7 517 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 TNKSO95271 1327 aa20.67■□□□□ 0.9
LMNA-208ENST00000448611 PRDM1O75626 825 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms