RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 PLCG2P16885 1265 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 ECE1P42892 770 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 IREB2P48200 963 aaKnown RBP16.17■□□□□ 0.18
SNHG4-201ENST00000448190 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
SNHG4-201ENST00000448190 POLR2AP24928 1970 aaKnown RBP16.17■□□□□ 0.18
SNHG4-201ENST00000448190 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
SNHG4-201ENST00000448190 PDE4AP27815 886 aa16.16■□□□□ 0.18
SNHG4-201ENST00000448190 USP5P45974 858 aa16.16■□□□□ 0.18
SNHG4-201ENST00000448190 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
SNHG4-201ENST00000448190 ZKSCAN4Q969J2 545 aaPredicted RBP16.16■□□□□ 0.18
SNHG4-201ENST00000448190 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
SNHG4-201ENST00000448190 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
SNHG4-201ENST00000448190 OSBPL5Q9H0X9 879 aaPredicted RBP16.16■□□□□ 0.18
SNHG4-201ENST00000448190 FAM196BA6NMK8 535 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SNHG4-201ENST00000448190 PRKAB2O43741 272 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 IGSF3O75054 1194 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 MBD4O95243 580 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 MAP3K9P80192 1104 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 KIF23Q02241 960 aaPredicted RBP16.15■□□□□ 0.18
SNHG4-201ENST00000448190 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
SNHG4-201ENST00000448190 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 CCDC102AQ96A19 550 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 PUS7LQ9H0K6 701 aaKnown RBP16.15■□□□□ 0.18
SNHG4-201ENST00000448190 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
SNHG4-201ENST00000448190 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 SKAP1Q86WV1 359 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 RILPL2Q969X0 211 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 WRNIP1Q96S55 665 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 ZNF341Q9BYN7 854 aa16.14■□□□□ 0.17
SNHG4-201ENST00000448190 SLC10A3P09131 477 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 INPP5BP32019 993 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNHG4-201ENST00000448190 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 OSBP2Q969R2 916 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 SEC62Q99442 399 aaKnown RBP16.13■□□□□ 0.17
SNHG4-201ENST00000448190 AKAP11Q9UKA4 1901 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 FLT1P17948 1338 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
SNHG4-201ENST00000448190 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
SNHG4-201ENST00000448190 VGLL4Q14135 290 aa16.12■□□□□ 0.17
SNHG4-201ENST00000448190 AIDAQ96BJ3 306 aa16.12■□□□□ 0.17
SNHG4-201ENST00000448190 CRNKL1Q9BZJ0 848 aaKnown RBP16.12■□□□□ 0.17
SNHG4-201ENST00000448190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNHG4-201ENST00000448190 GJA5P36382 358 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 MAP2K2P36507 400 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 EVX2Q03828 476 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 NOGQ13253 232 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
SNHG4-201ENST00000448190 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 CSADQ9Y600 493 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
SNHG4-201ENST00000448190 PHF20L1A8MW92 1017 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 M0R2C6 588 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 POLR3DP05423 398 aaPredicted RBP16.1■□□□□ 0.17
SNHG4-201ENST00000448190 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 WNK4Q96J92 1243 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
SNHG4-201ENST00000448190 PI4KBQ9UBF8 816 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
SNHG4-201ENST00000448190 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 CYP2D6P10635 497 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 PLCD1P51178 756 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 MAP3K10Q02779 954 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 RRP1BQ14684 758 aaKnown RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 CRACR2BQ8N4Y2 399 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 APPBP2Q92624 585 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 OPTNQ96CV9 577 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 DCP1AQ9NPI6 582 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 SNCAIPQ9Y6H5 919 aa16.09■□□□□ 0.17
SNHG4-201ENST00000448190 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-201ENST00000448190 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
SNHG4-201ENST00000448190 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
SNHG4-201ENST00000448190 ZMYM1Q5SVZ6 1142 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms