RNA–Protein interactions for RNA: ENST00000447676.6

PNCK-215, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2 BASIC

Gene PNCK, Length 1,585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-215	ENST00000447676	VPS53	Q5VIR6	699 aa		27.7	■■■□□ 2.03
PNCK-215	ENST00000447676	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.7	■■■□□ 2.03
PNCK-215	ENST00000447676	DEFB129	Q9H1M3	183 aa		27.7	■■■□□ 2.03
PNCK-215	ENST00000447676	TRAF5	O00463	557 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	USP5	P45974	858 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	CERS3	Q8IU89	383 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	SULF1	Q8IWU6	871 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	FKBP1C	Q5VVH2	108 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	SH3BP5L	Q7L8J4	393 aa		27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	MKRN1	Q9UHC7	482 aa	Known RBP	27.69	■■■□□ 2.02
PNCK-215	ENST00000447676	CCDC171	Q6TFL3	1326 aa		27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	GSG1L2	A8MUP6	293 aa		27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	TOMM70	O94826	608 aa		27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	SLC4A8	Q2Y0W8	1093 aa		27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	TEPSIN	Q96N21	525 aa		27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	27.68	■■■□□ 2.02
PNCK-215	ENST00000447676	TNFAIP1	Q13829	316 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	CDC37L1	Q7L3B6	337 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	FAM83A	Q86UY5	434 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	FAM151A	Q8WW52	585 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	SAP30BP	Q9UHR5	308 aa	Known RBP	27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	SSC5D	A1L4H1	1573 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	LAMB1	P07942	1786 aa		27.67	■■■□□ 2.02
PNCK-215	ENST00000447676	DDTL	A6NHG4	134 aa	Predicted RBP	27.66	■■■□□ 2.02
PNCK-215	ENST00000447676	SGSM2	O43147	1006 aa		27.66	■■■□□ 2.02
PNCK-215	ENST00000447676	ENTPD3	O75355	529 aa		27.66	■■■□□ 2.02
PNCK-215	ENST00000447676	EVX2	Q03828	476 aa		27.66	■■■□□ 2.02
PNCK-215	ENST00000447676	ITGBL1	O95965	494 aa	Predicted RBP	27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	SLURP2	P0DP57	97 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	TNNI2	P48788	182 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	ESYT1	Q9BSJ8	1104 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	RAD50	Q92878	1312 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	RBM46	Q8TBY0	533 aa	Known RBP	27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	CDCA5	Q96FF9	252 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	PALD1	Q9ULE6	856 aa		27.65	■■■□□ 2.02
PNCK-215	ENST00000447676	NPM3	O75607	178 aa	Known RBP	27.64	■■■□□ 2.01
PNCK-215	ENST00000447676	NBPF12	Q5TAG4	269 aa	Predicted RBP	27.64	■■■□□ 2.01
PNCK-215	ENST00000447676	SMC1B	Q8NDV3	1235 aa		27.64	■■■□□ 2.01
PNCK-215	ENST00000447676	RUFY2	Q8WXA3	655 aa		27.64	■■■□□ 2.01
PNCK-215	ENST00000447676	TRPM7	Q96QT4	1865 aa		27.63	■■■□□ 2.01
PNCK-215	ENST00000447676	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.63	■■■□□ 2.01
PNCK-215	ENST00000447676	SMIM22	K7EJ46	135 aa		27.63	■■■□□ 2.01
PNCK-215	ENST00000447676	HSPD1	P10809	573 aa	Known RBP	27.63	■■■□□ 2.01
PNCK-215	ENST00000447676	COL2A1	P02458	1487 aa	Predicted RBP	27.63	■■■□□ 2.01
PNCK-215	ENST00000447676	PATL2	C9JE40	543 aa	Known RBP	27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	CYP2D6	P10635	497 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	GNAT2	P19087	354 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	ATP8A2	Q9NTI2	1148 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	FZD1	Q9UP38	647 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	PPP2R3B	Q9Y5P8	575 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	ATRNL1	Q5VV63	1379 aa		27.62	■■■□□ 2.01
PNCK-215	ENST00000447676	CYP2D7	A0A087X1C5	515 aa		27.61	■■■□□ 2.01
PNCK-215	ENST00000447676	APP	P05067	770 aa		27.61	■■■□□ 2.01
PNCK-215	ENST00000447676	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.61	■■■□□ 2.01
PNCK-215	ENST00000447676	IFNL3	Q8IZI9	196 aa		27.61	■■■□□ 2.01
PNCK-215	ENST00000447676	MCM9	Q9NXL9	1143 aa		27.61	■■■□□ 2.01
PNCK-215	ENST00000447676	PTH1R	Q03431	593 aa		27.6	■■■□□ 2.01
PNCK-215	ENST00000447676	PASK	Q96RG2	1323 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	MFAP1	P55081	439 aa	Known RBP	27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	CTR9	Q6PD62	1173 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	CASC1	Q6TDU7	716 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	CSRNP1	Q96S65	589 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	ZNF408	Q9H9D4	720 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	LAMA4	Q16363	1823 aa		27.59	■■■□□ 2.01
PNCK-215	ENST00000447676	USP17L12	C9JPN9	530 aa		27.58	■■■□□ 2.01
PNCK-215	ENST00000447676	USP17L21	D6R901	530 aa		27.58	■■■□□ 2.01
PNCK-215	ENST00000447676	TDO2	P48775	406 aa		27.58	■■■□□ 2.01
PNCK-215	ENST00000447676	PLCD1	P51178	756 aa		27.58	■■■□□ 2.01
PNCK-215	ENST00000447676	OTOF	Q9HC10	1997 aa		27.57	■■■□□ 2
PNCK-215	ENST00000447676	FAM196B	A6NMK8	535 aa		27.57	■■■□□ 2
PNCK-215	ENST00000447676	PAPPA2	Q9BXP8	1791 aa		27.57	■■■□□ 2
PNCK-215	ENST00000447676	GIMAP6	Q6P9H5	292 aa		27.56	■■■□□ 2
PNCK-215	ENST00000447676	FGA	P02671	866 aa		27.56	■■■□□ 2
PNCK-215	ENST00000447676	POLR3D	P05423	398 aa	Predicted RBP	27.56	■■■□□ 2
PNCK-215	ENST00000447676	PRKG1	Q13976	671 aa		27.56	■■■□□ 2
PNCK-215	ENST00000447676	MIGA2	Q7L4E1	593 aa		27.56	■■■□□ 2
PNCK-215	ENST00000447676	LSG1	Q9H089	658 aa	Known RBP	27.56	■■■□□ 2
PNCK-215	ENST00000447676	NAPB	Q9H115	298 aa		27.56	■■■□□ 2
PNCK-215	ENST00000447676	FSTL1	Q12841	308 aa		27.55	■■■□□ 2
PNCK-215	ENST00000447676	DSCC1	Q9BVC3	393 aa		27.55	■■■□□ 2
PNCK-215	ENST00000447676	DHX36	Q9H2U1	1008 aa	Known RBP	27.55	■■■□□ 2
PNCK-215	ENST00000447676	DNAJC18	Q9H819	358 aa		27.55	■■■□□ 2
PNCK-215	ENST00000447676	C8orf34	Q49A92	452 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	C12orf60	Q5U649	245 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	CST9	Q5W186	159 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	MOB2	Q70IA6	237 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	DDRGK1	Q96HY6	314 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	NACAP1	Q9BZK3	213 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	ANO2	Q9NQ90	1003 aa		27.54	■■■□□ 2
PNCK-215	ENST00000447676	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.54	■■■□□ 2
PNCK-215	ENST00000447676	MINDY4B	A8MYZ0	360 aa		27.53	■■■□□ 2
PNCK-215	ENST00000447676	CELF2	O95319	508 aa	Known RBP	27.53	■■■□□ 2
PNCK-215	ENST00000447676	ALX1	Q15699	326 aa		27.53	■■■□□ 2
PNCK-215	ENST00000447676	MYH8	P13535	1937 aa		27.53	■■■□□ 2
PNCK-215	ENST00000447676	SBK1	Q52WX2	424 aa		27.52	■■■□□ 2
PNCK-215	ENST00000447676	STK11IP	Q8N1F8	1099 aa		27.52	■■■□□ 2
PNCK-215	ENST00000447676	DYNLL2	Q96FJ2	89 aa		27.52	■■■□□ 2
PNCK-215	ENST00000447676	PI4KB	Q9UBF8	816 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms