RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 GFRA2O00451 464 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 ADH5P11766 374 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 AKAP4Q5JQC9 854 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 FAM196AQ6ZSG2 479 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 TXNRD3Q86VQ6 643 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 DZIP1LQ8IYY4 767 aaKnown RBP7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 C12orf50Q8NA57 414 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 NT5C1AQ9BXI3 368 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 CRIM1Q9NZV1 1036 aa7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
HMGB3P6-201ENST00000444896 DCDC2CA8MYV0 355 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 CRKP46108 304 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 PREPP48147 710 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 RING1Q06587 406 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 PAK2Q13177 524 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 C12orf40Q86WS4 652 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 FAM46AQ96IP4 442 aaKnown RBP7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 DISC1Q9NRI5 854 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 CSADQ9Y600 493 aa7.39□□□□□ -1.23
HMGB3P6-201ENST00000444896 ROBO2Q9HCK4 1378 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 GLB1P16278 677 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 ID3Q02535 119 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 FDX2Q6P4F2 183 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 C2CD4AQ8NCU7 369 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 TINF2Q9BSI4 451 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 LRRC3Q9BY71 257 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
HMGB3P6-201ENST00000444896 TLR3O15455 904 aaKnown RBP7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 GJA8P48165 433 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 ERVK-24P63145 666 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 MPP2Q14168 576 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 DOC2BQ14184 412 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 ARMC10Q8N2F6 343 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 HIF3AQ9Y2N7 669 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 POLR3KQ9Y2Y1 108 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 ACTL7BQ9Y614 415 aa7.37□□□□□ -1.23
HMGB3P6-201ENST00000444896 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 WIPI1Q5MNZ9 446 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 SLITRK4Q8IW52 837 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 RASGRP4Q8TDF6 673 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 CEP41Q9BYV8 373 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 FAM105AQ9NUU6 356 aa7.36□□□□□ -1.23
HMGB3P6-201ENST00000444896 SART1O43290 800 aaKnown RBP7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 NTF4P34130 210 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 HDXQ7Z353 690 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 REC114Q7Z4M0 266 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 NKD1Q969G9 470 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 ELMO3Q96BJ8 720 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 GPRASP2Q96D09 838 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 INPP5FQ9Y2H2 1132 aa7.35□□□□□ -1.23
HMGB3P6-201ENST00000444896 NEFMP07197 916 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 ASPAP45381 313 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 ZC3H6P61129 1189 aaKnown RBP7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 TTLL4Q14679 1199 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 NAALADL2Q58DX5 795 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 TP53INP1Q96A56 240 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 C8orf37Q96NL8 207 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 ATXN3LQ9H3M9 355 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
HMGB3P6-201ENST00000444896 BPNT1O95861 308 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 PROCP04070 461 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 ZBTB37Q5TC79 503 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 SLC43A3Q8NBI5 491 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 MYRFLQ96LU7 910 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 ACSS3Q9H6R3 686 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 CORINQ9Y5Q5 1042 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 TACC3Q9Y6A5 838 aa7.33□□□□□ -1.24
HMGB3P6-201ENST00000444896 PRR36Q9H6K5 1346 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 PRAMEF27A3QJZ7 478 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 FANCGO15287 622 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 FURINP09958 794 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 UVSSAQ2YD98 709 aa7.32□□□□□ -1.24
HMGB3P6-201ENST00000444896 UBE3DQ7Z6J8 389 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms