RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
LTBR-204ENST00000444814 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
LTBR-204ENST00000444814 AATFQ9NY61 560 aaKnown RBP eCLIP14.81□□□□□ -0.04
LTBR-204ENST00000444814 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
LTBR-204ENST00000444814 USP5P45974 858 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 IRX6P78412 446 aaPredicted RBP14.8□□□□□ -0.04
LTBR-204ENST00000444814 PICALMQ13492 652 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 PRKG1Q13976 671 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 CYP4F22Q6NT55 531 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
LTBR-204ENST00000444814 CRNKL1Q9BZJ0 848 aaKnown RBP14.8□□□□□ -0.04
LTBR-204ENST00000444814 AOX1Q06278 1338 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 MAGEB6P1A0A0J9YX57 407 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 UBE2Q2LH0YL09 131 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 HLA-DOAP06340 250 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 PDE6AP16499 860 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 UBE3CQ15386 1083 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 TICAM2Q86XR7 235 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 TEPSINQ96N21 525 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 CSRNP1Q96S65 589 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
LTBR-204ENST00000444814 POLR2AP24928 1970 aaKnown RBP14.78□□□□□ -0.04
LTBR-204ENST00000444814 MYH2Q9UKX2 1941 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 CA12O43570 354 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 RHBDL3P58872 404 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 LDLRAD1Q5T700 205 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 DLK2Q6UY11 383 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 KBTBD3Q8NAB2 608 aa14.78□□□□□ -0.04
LTBR-204ENST00000444814 COL2A1P02458 1487 aaPredicted RBP14.78□□□□□ -0.04
LTBR-204ENST00000444814 WDHD1O75717 1129 aaPredicted RBP14.77□□□□□ -0.04
LTBR-204ENST00000444814 SLC10A3P09131 477 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 NUCB1Q02818 461 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 SREBF2Q12772 1141 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 NFIAQ12857 509 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 LNPKQ9C0E8 428 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 OSBPL5Q9H0X9 879 aaPredicted RBP14.77□□□□□ -0.04
LTBR-204ENST00000444814 FAM198AQ9UFP1 575 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 STAP2Q9UGK3 403 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 NDUFB9Q9Y6M9 179 aa14.77□□□□□ -0.04
LTBR-204ENST00000444814 ZNF532Q9HCE3 1301 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 AKAP11Q9UKA4 1901 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 USP2O75604 605 aaPredicted RBP14.77□□□□□ -0.05
LTBR-204ENST00000444814 ZBTB48P10074 688 aaPredicted RBP14.77□□□□□ -0.05
LTBR-204ENST00000444814 ADD2P35612 726 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 INHBEP58166 350 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 TTC6Q86TZ1 520 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 MIGA1Q8NAN2 632 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.05
LTBR-204ENST00000444814 EVI5LQ96CN4 794 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 WRNIP1Q96S55 665 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 FSD1Q9BTV5 496 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
LTBR-204ENST00000444814 ATRNL1Q5VV63 1379 aa14.77□□□□□ -0.05
LTBR-204ENST00000444814 IGHDP01880 384 aa14.76□□□□□ -0.05
LTBR-204ENST00000444814 PDE1AP54750 535 aa14.76□□□□□ -0.05
LTBR-204ENST00000444814 CRACR2BQ8N4Y2 399 aaPredicted RBP14.76□□□□□ -0.05
LTBR-204ENST00000444814 ZNF384Q8TF68 577 aa14.76□□□□□ -0.05
LTBR-204ENST00000444814 TGFBRAP1Q8WUH2 860 aa14.76□□□□□ -0.05
LTBR-204ENST00000444814 PI4KBQ9UBF8 816 aa14.76□□□□□ -0.05
LTBR-204ENST00000444814 RFX7Q2KHR2 1363 aa14.75□□□□□ -0.05
LTBR-204ENST00000444814 MANSC4A6NHS7 340 aaPredicted RBP14.75□□□□□ -0.05
LTBR-204ENST00000444814 TBC1D12O60347 775 aa14.75□□□□□ -0.05
LTBR-204ENST00000444814 OTUD7BQ6GQQ9 843 aa14.75□□□□□ -0.05
LTBR-204ENST00000444814 RASAL3Q86YV0 1011 aa14.75□□□□□ -0.05
LTBR-204ENST00000444814 FOXP4Q8IVH2 680 aaPredicted RBP14.75□□□□□ -0.05
LTBR-204ENST00000444814 PICK1Q9NRD5 415 aa14.75□□□□□ -0.05
LTBR-204ENST00000444814 RNF113AO15541 343 aaKnown RBP14.74□□□□□ -0.05
LTBR-204ENST00000444814 GNAT2P19087 354 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 MOB2Q70IA6 237 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.74□□□□□ -0.05
LTBR-204ENST00000444814 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 APPBP2Q92624 585 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.74□□□□□ -0.05
LTBR-204ENST00000444814 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 FLT1P17948 1338 aa14.74□□□□□ -0.05
LTBR-204ENST00000444814 MIGA2Q7L4E1 593 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 ADGRA1Q86SQ6 560 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 ERO1BQ86YB8 467 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 MAPKAPK5Q8IW41 473 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 EDC3Q96F86 508 aaKnown RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 TBC1D2Q9BYX2 928 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 DDX4Q9NQI0 724 aaKnown RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 GINM1Q9NU53 330 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 SSC5DA1L4H1 1573 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 ALDH1A1P00352 501 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 POLR3DP05423 398 aaPredicted RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 PDIA4P13667 645 aaKnown RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 DYNLL1P63167 89 aaKnown RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 KIF23Q02241 960 aaPredicted RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 SPRYD7Q5W111 196 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 TSHZ3Q63HK5 1081 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 CENPQQ7L2Z9 268 aaPredicted RBP14.73□□□□□ -0.05
LTBR-204ENST00000444814 OSBPL3Q9H4L5 887 aa14.73□□□□□ -0.05
LTBR-204ENST00000444814 DOCK2Q92608 1830 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms