RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 RAI14Q9P0K7 980 aa23.22■■□□□ 1.31
HMGB3P22-201ENST00000442010 NPM3O75607 178 aaKnown RBP23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 LDHCP07864 332 aa23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 GTF2A2P52657 109 aa23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 GSTO1P78417 241 aa23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 MAP3K10Q02779 954 aa23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 ERC1Q8IUD2 1116 aa23.21■■□□□ 1.31
HMGB3P22-201ENST00000442010 PHIPQ8WWQ0 1821 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 DDTLA6NHG4 134 aaPredicted RBP23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 FKTNO75072 461 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 MAP4K4O95819 1239 aaPredicted RBP23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 PDE3AQ14432 1141 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 OTUD7BQ6GQQ9 843 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 LRP2BPQ9P2M1 347 aa23.2■■□□□ 1.3
HMGB3P22-201ENST00000442010 CCL15-CCL14A0A0B4J2E2 113 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 CCDC85CA6NKD9 419 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 PHF20L1A8MW92 1017 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 IRF6O14896 467 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 ZAP70P43403 619 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 CRHR2Q13324 411 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 PPIL2Q13356 520 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 CCL15Q16663 113 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 PTPRFP10586 1907 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
HMGB3P22-201ENST00000442010 SIPA1L1O43166 1804 aa23.18■■□□□ 1.3
HMGB3P22-201ENST00000442010 IGSF3O75054 1194 aa23.18■■□□□ 1.3
HMGB3P22-201ENST00000442010 PPATQ06203 517 aa23.18■■□□□ 1.3
HMGB3P22-201ENST00000442010 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
HMGB3P22-201ENST00000442010 RHPN1Q8TCX5 695 aa23.18■■□□□ 1.3
HMGB3P22-201ENST00000442010 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
HMGB3P22-201ENST00000442010 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
HMGB3P22-201ENST00000442010 PICALMQ13492 652 aa23.17■■□□□ 1.3
HMGB3P22-201ENST00000442010 FAM43AQ8N2R8 423 aa23.17■■□□□ 1.3
HMGB3P22-201ENST00000442010 PIH1D3Q9NQM4 214 aaKnown RBP23.17■■□□□ 1.3
HMGB3P22-201ENST00000442010 PKN2Q16513 984 aaKnown RBP23.16■■□□□ 1.3
HMGB3P22-201ENST00000442010 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
HMGB3P22-201ENST00000442010 AACSQ86V21 672 aa23.16■■□□□ 1.3
HMGB3P22-201ENST00000442010 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
HMGB3P22-201ENST00000442010 IL1RAPL2Q9NP60 686 aa23.16■■□□□ 1.3
HMGB3P22-201ENST00000442010 ATAD5Q96QE3 1844 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 HMMRO75330 724 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 CETPP11597 493 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 PPP4CP60510 307 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 SNAPC2Q13487 334 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 NAA16Q6N069 864 aaPredicted RBP23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 ZSCAN29Q8IWY8 852 aaPredicted RBP23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 KCNH4Q9UQ05 1017 aa23.15■■□□□ 1.3
HMGB3P22-201ENST00000442010 TBC1D12O60347 775 aa23.14■■□□□ 1.29
HMGB3P22-201ENST00000442010 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.29
HMGB3P22-201ENST00000442010 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.29
HMGB3P22-201ENST00000442010 KIF1BPQ96EK5 621 aa23.14■■□□□ 1.29
HMGB3P22-201ENST00000442010 ZCCHC17Q9NP64 241 aaKnown RBP23.14■■□□□ 1.29
HMGB3P22-201ENST00000442010 BTBD19C9JJ37 291 aa23.13■■□□□ 1.29
HMGB3P22-201ENST00000442010 OSBPL5Q9H0X9 879 aaPredicted RBP23.13■■□□□ 1.29
HMGB3P22-201ENST00000442010 AATFQ9NY61 560 aaKnown RBP eCLIP23.13■■□□□ 1.29
HMGB3P22-201ENST00000442010 NDUFB9Q9Y6M9 179 aa23.13■■□□□ 1.29
HMGB3P22-201ENST00000442010 RGS19P49795 217 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 MOGSQ13724 837 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 TAF1CQ15572 869 aaPredicted RBP23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 TEX11Q8IYF3 940 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 ANTXR1Q9H6X2 564 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 MYH1P12882 1939 aa23.12■■□□□ 1.29
HMGB3P22-201ENST00000442010 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
HMGB3P22-201ENST00000442010 BAG3O95817 575 aa23.11■■□□□ 1.29
HMGB3P22-201ENST00000442010 CAP1Q01518 475 aa23.11■■□□□ 1.29
HMGB3P22-201ENST00000442010 ZFYVE28Q9HCC9 887 aa23.11■■□□□ 1.29
HMGB3P22-201ENST00000442010 HPS5Q9UPZ3 1129 aa23.11■■□□□ 1.29
HMGB3P22-201ENST00000442010 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
HMGB3P22-201ENST00000442010 PTPRAP18433 802 aa23.1■■□□□ 1.29
HMGB3P22-201ENST00000442010 FBXO46Q6PJ61 603 aaPredicted RBP23.1■■□□□ 1.29
HMGB3P22-201ENST00000442010 CLASRPQ8N2M8 674 aaKnown RBP23.1■■□□□ 1.29
HMGB3P22-201ENST00000442010 APBB1O00213 710 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 PLCG2P16885 1265 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 SP3Q02447 781 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 OTOP1Q7RTM1 612 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 ERO1AQ96HE7 468 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 NOL10Q9BSC4 688 aaKnown RBP23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 ZSWIM8A7E2V4 1837 aa23.09■■□□□ 1.29
HMGB3P22-201ENST00000442010 HTTP42858 3142 aa23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 CXCL11O14625 94 aa23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 IDH1O75874 414 aaKnown RBP23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 ANKRD23Q86SG2 305 aa23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 CD99L2Q8TCZ2 262 aa23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 AFG3L2Q9Y4W6 797 aa23.08■■□□□ 1.29
HMGB3P22-201ENST00000442010 FAM196BA6NMK8 535 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 TLR2O60603 784 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 CYP7A1P22680 504 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 TGFBRAP1Q8WUH2 860 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 TRIM17Q9Y577 477 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 ZHX2Q9Y6X8 837 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 FLT1P17948 1338 aa23.07■■□□□ 1.28
HMGB3P22-201ENST00000442010 MYH7P12883 1935 aa23.06■■□□□ 1.28
HMGB3P22-201ENST00000442010 DYNLL1P63167 89 aaKnown RBP23.06■■□□□ 1.28
HMGB3P22-201ENST00000442010 TMED8Q6PL24 325 aaPredicted RBP23.06■■□□□ 1.28
HMGB3P22-201ENST00000442010 MAGEB6Q8N7X4 407 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms