RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF594Q96JF6 807 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 ZNF512BQ96KM6 892 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 NLRP3Q96P20 1036 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 HAUS7Q99871 368 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 LRRC4BQ9NT99 713 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 PKD2L1Q9P0L9 805 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 DBNLQ9UJU6 430 aaKnown RBP4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
HMGB1P37-201ENST00000439613 RFX7Q2KHR2 1363 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 CARMIL3Q8ND23 1372 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 CASZ1Q86V15 1759 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 RAD50Q92878 1312 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 SGSM2O43147 1006 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 SIAH2O43255 324 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 GDF9O60383 454 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 IFIT1P09914 478 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 UQCRFS1P1P0C7P4 283 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 SLC5A1P13866 664 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ANAPC15P60006 121 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 TIMM10P62072 90 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 NR1H3Q13133 447 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 RABEP1Q15276 862 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 TTC39AQ5SRH9 613 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ANKRD18AQ8IVF6 992 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 NLGN1Q8N2Q7 840 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 FAM174AQ8TBP5 190 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ADAM32Q8TC27 787 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 LPIN2Q92539 896 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 GLMNQ92990 594 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 SNX21Q969T3 373 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 XAGE2Q96GT9 111 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 MRGPRX2Q96LB1 330 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 CCDC85AQ96PX6 553 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 DBNDD2Q9BQY9 259 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 FSD1Q9BTV5 496 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 PUS3Q9BZE2 481 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ANKRD2Q9GZV1 360 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 GNL3LQ9NVN8 582 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 BSDC1Q9NW68 430 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 TLR7Q9NYK1 1049 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 TFCP2L1Q9NZI6 479 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 RGS17Q9UGC6 210 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 SRP68Q9UHB9 627 aaKnown RBP4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 PCDHB9Q9Y5E1 797 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ZNF609O15014 1411 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 RIC1Q4ADV7 1423 aa4.78□□□□□ -1.64
HMGB1P37-201ENST00000439613 ARAP2Q8WZ64 1704 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 TNS1Q9HBL0 1735 aaKnown RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 LRP5O75197 1615 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 MAP4K4O95819 1239 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 ZFYP08048 801 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 GYS1P13807 737 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 TM4SF1P30408 202 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 RPS8P62241 208 aaKnown RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 ST5P78524 1137 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 SF3B2Q13435 895 aaKnown RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 NFIXQ14938 502 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 TTF1Q15361 905 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 ZSCAN25Q6NSZ9 544 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 POTEAQ6S8J7 498 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 CWC27Q6UX04 472 aaKnown RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 HSCBQ8IWL3 235 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 VGLL2Q8N8G2 317 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 CNBD1Q8NA66 436 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 KBTBD3Q8NAB2 608 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 BOLA2Q9H3K6 86 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 ANO2Q9NQ90 1003 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 SEC31BQ9NQW1 1179 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 MYH7P12883 1935 aa4.77□□□□□ -1.65
HMGB1P37-201ENST00000439613 AKAP11Q9UKA4 1901 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 TNFRSF10AO00220 468 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 GOLIM4O00461 696 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 RNF113AO15541 343 aaKnown RBP4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 IGSF3O75054 1194 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 SERPINB2P05120 415 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 FGFR2P21802 821 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 MCM2P49736 904 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 MCCD1P59942 119 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR20EP86478 221 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR20CP86479 221 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR20DP86480 221 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR20BP86481 221 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR20AP86496 221 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 CHRNDQ07001 517 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 UBE4AQ14139 1066 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 QSER1Q2KHR3 1735 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 MCMDC2Q4G0Z9 681 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 RNF20Q5VTR2 975 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 PRR5LQ6MZQ0 368 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 TMED8Q6PL24 325 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 TRIM67Q6ZTA4 783 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 TMC4Q7Z404 712 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 AMIGO3Q86WK7 504 aa4.76□□□□□ -1.65
HMGB1P37-201ENST00000439613 CCDC125Q86Z20 511 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms