RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DCP1AQ9NPI6 582 aaPredicted RBP22.01■■□□□ 1.11
HDAC6-208ENST00000438518 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
HDAC6-208ENST00000438518 REC8O95072 547 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 HSPD1P10809 573 aaKnown RBP22■■□□□ 1.11
HDAC6-208ENST00000438518 NFIAQ12857 509 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 ALX1Q15699 326 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 CCDC129Q6ZRS4 1044 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 CDC37L1Q7L3B6 337 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 SDR42E1Q8WUS8 393 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 ARPP21Q9UBL0 812 aaPredicted RBP22■■□□□ 1.11
HDAC6-208ENST00000438518 FAM198AQ9UFP1 575 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 MKRN1Q9UHC7 482 aaKnown RBP22■■□□□ 1.11
HDAC6-208ENST00000438518 CLEC11AQ9Y240 323 aa22■■□□□ 1.11
HDAC6-208ENST00000438518 GSG1L2A8MUP6 293 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 TCP10L2B9ZVM9 353 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 APPP05067 770 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 PICALMQ13492 652 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 HOOK2Q96ED9 719 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 BAZ2AQ9UIF9 1905 aaKnown RBP21.99■■□□□ 1.11
HDAC6-208ENST00000438518 POLR2AP24928 1970 aaKnown RBP21.99■■□□□ 1.11
HDAC6-208ENST00000438518 ASTN2O75129 1339 aaPredicted RBP21.99■■□□□ 1.11
HDAC6-208ENST00000438518 LAMA4Q16363 1823 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 CNTNAP1P78357 1384 aa21.99■■□□□ 1.11
HDAC6-208ENST00000438518 CACNB3P54284 484 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 RASA3Q14644 834 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 MAPKAPK5Q8IW41 473 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 ZNF784Q8NCA9 323 aaPredicted RBP21.98■■□□□ 1.11
HDAC6-208ENST00000438518 NAPBQ9H115 298 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 DEFB129Q9H1M3 183 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 IL25Q9H293 177 aa21.98■■□□□ 1.11
HDAC6-208ENST00000438518 DDX4Q9NQI0 724 aaKnown RBP21.98■■□□□ 1.11
HDAC6-208ENST00000438518 KIF3CO14782 793 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 PRKAB2O43741 272 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 TDO2P48775 406 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 SBK1Q52WX2 424 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 CHADLQ6NUI6 762 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 KRT26Q7Z3Y9 468 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 TTC6Q86TZ1 520 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 CTNNA3Q9UI47 895 aa21.97■■□□□ 1.11
HDAC6-208ENST00000438518 HLA-DOAP06340 250 aa21.96■■□□□ 1.11
HDAC6-208ENST00000438518 C8orf34Q49A92 452 aa21.96■■□□□ 1.11
HDAC6-208ENST00000438518 VPS53Q5VIR6 699 aa21.96■■□□□ 1.11
HDAC6-208ENST00000438518 ANO2Q9NQ90 1003 aa21.96■■□□□ 1.11
HDAC6-208ENST00000438518 U3KPZ7 1027 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-208ENST00000438518 FOXP2O15409 715 aa21.95■■□□□ 1.1
HDAC6-208ENST00000438518 TCP10Q12799 353 aa21.95■■□□□ 1.1
HDAC6-208ENST00000438518 MAP4K1Q92918 833 aa21.95■■□□□ 1.1
HDAC6-208ENST00000438518 EPB41L4AQ9HCS5 686 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-208ENST00000438518 MCM9Q9NXL9 1143 aa21.95■■□□□ 1.1
HDAC6-208ENST00000438518 TOMM70O94826 608 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 POLR3DP05423 398 aaPredicted RBP21.94■■□□□ 1.1
HDAC6-208ENST00000438518 POTEIP0CG38 1075 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 POTEJP0CG39 1038 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 SUPT20HL1Q3ZLR7 823 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 ZSCAN29Q8IWY8 852 aaPredicted RBP21.94■■□□□ 1.1
HDAC6-208ENST00000438518 RBM46Q8TBY0 533 aaKnown RBP21.94■■□□□ 1.1
HDAC6-208ENST00000438518 LSG1Q9H089 658 aaKnown RBP21.94■■□□□ 1.1
HDAC6-208ENST00000438518 EHD4Q9H223 541 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 PI4KBQ9UBF8 816 aa21.94■■□□□ 1.1
HDAC6-208ENST00000438518 FGAP02671 866 aa21.93■■□□□ 1.1
HDAC6-208ENST00000438518 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
HDAC6-208ENST00000438518 ROBO3Q96MS0 1386 aa21.93■■□□□ 1.1
HDAC6-208ENST00000438518 CSRNP1Q96S65 589 aa21.93■■□□□ 1.1
HDAC6-208ENST00000438518 TMEM39BQ9GZU3 492 aa21.93■■□□□ 1.1
HDAC6-208ENST00000438518 SIPA1L1O43166 1804 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 USP17L12C9JPN9 530 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 USP17L21D6R901 530 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 SLC3A2P08195 630 aaKnown RBP21.92■■□□□ 1.1
HDAC6-208ENST00000438518 NT5C2P49902 561 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 IMMTQ16891 758 aaKnown RBP21.92■■□□□ 1.1
HDAC6-208ENST00000438518 C12orf60Q5U649 245 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 MAP1SQ66K74 1059 aaPredicted RBP21.92■■□□□ 1.1
HDAC6-208ENST00000438518 CTR9Q6PD62 1173 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
HDAC6-208ENST00000438518 TEPSINQ96N21 525 aa21.92■■□□□ 1.1
HDAC6-208ENST00000438518 HERC5Q9UII4 1024 aaKnown RBP21.92■■□□□ 1.1
HDAC6-208ENST00000438518 MYH8P13535 1937 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 DDTLA6NHG4 134 aaPredicted RBP21.91■■□□□ 1.1
HDAC6-208ENST00000438518 TBC1D12O60347 775 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 PCP11498 1178 aaKnown RBP21.91■■□□□ 1.1
HDAC6-208ENST00000438518 NF2P35240 595 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 METTL16Q86W50 562 aaKnown RBP21.91■■□□□ 1.1
HDAC6-208ENST00000438518 ANAPC4Q9UJX5 808 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 PALD1Q9ULE6 856 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 TRPM7Q96QT4 1865 aa21.91■■□□□ 1.1
HDAC6-208ENST00000438518 ADM5C9JUS6 153 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 PTH1RQ03431 593 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 FSTL1Q12841 308 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 RNF20Q5VTR2 975 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 DCAF15Q66K64 600 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 SH3BP5LQ7L8J4 393 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 ZFPM1Q8IX07 1006 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 GLIS2Q9BZE0 524 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-208ENST00000438518 ZNF287Q9HBT7 754 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 SAP30BPQ9UHR5 308 aaKnown RBP21.9■■□□□ 1.1
HDAC6-208ENST00000438518 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
HDAC6-208ENST00000438518 RBM8AQ9Y5S9 174 aaKnown RBP21.9■■□□□ 1.1
HDAC6-208ENST00000438518 ZNF213O14771 459 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 675.2 ms