RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CRIM1Q9NZV1 1036 aa6.17□□□□□ -1.42
TRAPPC13-204ENST00000438419 KIAA1522Q9P206 1035 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-204ENST00000438419 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
TRAPPC13-204ENST00000438419 CYP8B1Q9UNU6 501 aa6.17□□□□□ -1.42
TRAPPC13-204ENST00000438419 SAMM50Q9Y512 469 aa6.17□□□□□ -1.42
TRAPPC13-204ENST00000438419 TRIM37O94972 964 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 SLFN14P0C7P3 912 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 MAP3K11Q16584 847 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 TSNAXIP1Q2TAA8 658 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 BEND4Q6ZU67 534 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 FBLIM1Q8WUP2 373 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 EZH1Q92800 747 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 ZNF428Q96B54 188 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 NOC4LQ9BVI4 516 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 DISC1Q9NRI5 854 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 AP4E1Q9UPM8 1137 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 RECKO95980 971 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 FSTP19883 344 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 ASPAP45381 313 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 LIG3P49916 1009 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 USP11P51784 963 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 ID3Q02535 119 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 LRRC14Q15048 493 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 FANCD2OSQ96PS1 177 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 BACH2Q9BYV9 841 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 KCNF1Q9H3M0 494 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 ACSS3Q9H6R3 686 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 PCDHB5Q9Y5E4 795 aa6.16□□□□□ -1.42
TRAPPC13-204ENST00000438419 RLBP1P12271 317 aa6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 RPS26P62854 115 aaKnown RBP6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 HNRNPUQ00839 825 aaKnown RBP eCLIP6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 AGMOQ6ZNB7 445 aa6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 TMEM87AQ8NBN3 555 aa6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 TLR6Q9Y2C9 796 aa6.15□□□□□ -1.43
TRAPPC13-204ENST00000438419 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 FAM95CA0A1B0GW59 222 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 E9PSI1 815 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 NFICP08651 508 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 TFE3P19532 575 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 RNF43Q68DV7 783 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 SHISA5Q8N114 240 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 ACSBG1Q96GR2 724 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 SEMA6CQ9H3T2 930 aa6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 METTL5Q9NRN9 209 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-204ENST00000438419 F6X3S4 739 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 SCAMP3O14828 347 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 DYNC1LI2O43237 492 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 IGLV1-40P01703 118 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 NEFMP07197 916 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 RAB6AP20340 208 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 RXRBP28702 533 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 NTF4P34130 210 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 CDK8P49336 464 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 ERVK-24P63145 666 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 RING1Q06587 406 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 NFIAQ12857 509 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 INPP5AQ14642 412 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 SEZ6L2Q6UXD5 910 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 PHC3Q8NDX5 983 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 CSADQ9Y600 493 aa6.13□□□□□ -1.43
TRAPPC13-204ENST00000438419 DCDC2CA8MYV0 355 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 ZNF76P36508 570 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 SEPT6Q14141 434 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 NFKBIBQ15653 356 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 LRFN4Q6PJG9 635 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 HS2ST1Q7LGA3 356 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 C12orf40Q86WS4 652 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 GATA6Q92908 595 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
TRAPPC13-204ENST00000438419 HCLS1P14317 486 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 ADMP35318 185 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 PWP1Q13610 501 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 PPM1JQ5JR12 505 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 ERMP1Q7Z2K6 904 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 NPM2Q86SE8 214 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 SLC51AQ86UW1 340 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 COPRSQ9NQ92 184 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 PRKAG2Q9UGJ0 569 aa6.11□□□□□ -1.43
TRAPPC13-204ENST00000438419 FANCCQ00597 558 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 PAOXQ6QHF9 649 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 CYFIP1Q7L576 1253 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 ZDHHC13Q8IUH4 622 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 RNF214Q8ND24 703 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 ISL2Q96A47 359 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 PLPPR2Q96GM1 343 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 RHOVQ96L33 236 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 MFSD14AQ96MC6 490 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 DBNDD2Q9BQY9 259 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 YIPF2Q9BWQ6 316 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms