RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 PICK1Q9NRD5 415 aa23.75■■□□□ 1.39
MUC1-211ENST00000438413 ZHX2Q9Y6X8 837 aa23.75■■□□□ 1.39
MUC1-211ENST00000438413 PHF20L1A8MW92 1017 aa23.74■■□□□ 1.39
MUC1-211ENST00000438413 RASGRF1Q13972 1273 aa23.74■■□□□ 1.39
MUC1-211ENST00000438413 ZSCAN29Q8IWY8 852 aaPredicted RBP23.74■■□□□ 1.39
MUC1-211ENST00000438413 SHISA4Q96DD7 197 aa23.74■■□□□ 1.39
MUC1-211ENST00000438413 ABCF2Q9UG63 623 aa23.74■■□□□ 1.39
MUC1-211ENST00000438413 PHIPQ8WWQ0 1821 aa23.73■■□□□ 1.39
MUC1-211ENST00000438413 A0A0G2JLL6 359 aaPredicted RBP23.73■■□□□ 1.39
MUC1-211ENST00000438413 BCRP11274 1271 aa23.73■■□□□ 1.39
MUC1-211ENST00000438413 TIMM10P62072 90 aa23.73■■□□□ 1.39
MUC1-211ENST00000438413 SH3BP5LQ7L8J4 393 aa23.73■■□□□ 1.39
MUC1-211ENST00000438413 FASTKD5Q7L8L6 764 aaKnown RBP23.73■■□□□ 1.39
MUC1-211ENST00000438413 PRRT2Q7Z6L0 340 aaPredicted RBP23.73■■□□□ 1.39
MUC1-211ENST00000438413 SLF2Q8IX21 1173 aa23.73■■□□□ 1.39
MUC1-211ENST00000438413 COLQQ9Y215 455 aaPredicted RBP23.73■■□□□ 1.39
MUC1-211ENST00000438413 PDS5AQ29RF7 1337 aaKnown RBP23.73■■□□□ 1.39
MUC1-211ENST00000438413 PTPRAP18433 802 aa23.72■■□□□ 1.39
MUC1-211ENST00000438413 FXR1P51114 621 aaKnown RBP eCLIP23.72■■□□□ 1.39
MUC1-211ENST00000438413 FCGRTP55899 365 aa23.72■■□□□ 1.39
MUC1-211ENST00000438413 A0A1B0GUL7 405 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 DDTLA6NHG4 134 aaPredicted RBP23.71■■□□□ 1.39
MUC1-211ENST00000438413 H0YGN5 161 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 BTDP43251 543 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 PRKCZQ05513 592 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 PICALMQ13492 652 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 SPTY2D1Q68D10 685 aaPredicted RBP23.71■■□□□ 1.39
MUC1-211ENST00000438413 GADL1Q6ZQY3 521 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 NKX2-3Q8TAU0 364 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 FAM163AQ96GL9 167 aaPredicted RBP23.71■■□□□ 1.39
MUC1-211ENST00000438413 DDX4Q9NQI0 724 aaKnown RBP23.71■■□□□ 1.39
MUC1-211ENST00000438413 AFG3L2Q9Y4W6 797 aa23.71■■□□□ 1.39
MUC1-211ENST00000438413 MROH7-TTC4A0A0A0MT08 1334 aa23.7■■□□□ 1.38
MUC1-211ENST00000438413 SLURP2P0DP57 97 aa23.7■■□□□ 1.38
MUC1-211ENST00000438413 CCL5P13501 91 aa23.7■■□□□ 1.38
MUC1-211ENST00000438413 XAGE2Q96GT9 111 aa23.7■■□□□ 1.38
MUC1-211ENST00000438413 BIN2Q9UBW5 565 aaPredicted RBP23.7■■□□□ 1.38
MUC1-211ENST00000438413 AKAP2Q9Y2D5 859 aa23.7■■□□□ 1.38
MUC1-211ENST00000438413 UBXN2AP68543 259 aa23.69■■□□□ 1.38
MUC1-211ENST00000438413 TFCP2Q12800 502 aa23.69■■□□□ 1.38
MUC1-211ENST00000438413 MVPQ14764 893 aaKnown RBP23.69■■□□□ 1.38
MUC1-211ENST00000438413 SRGAP3O43295 1099 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
MUC1-211ENST00000438413 GJB1P08034 283 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 GJA8P48165 433 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 ERICH6Q7L0X2 663 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 RNF208Q9H0X6 261 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 GABRQQ9UN88 632 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 SLC45A1Q9Y2W3 748 aa23.68■■□□□ 1.38
MUC1-211ENST00000438413 GNAI3P08754 354 aa23.67■■□□□ 1.38
MUC1-211ENST00000438413 MECOMQ03112 1051 aa23.67■■□□□ 1.38
MUC1-211ENST00000438413 SLAIN1Q8ND83 568 aa23.67■■□□□ 1.38
MUC1-211ENST00000438413 ATAD5Q96QE3 1844 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 CEP290O15078 2479 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 GPR75-ASB3A0A0A6YYF3 556 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 TRIM75PA6NK02 468 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 RARSP54136 660 aaKnown RBP23.66■■□□□ 1.38
MUC1-211ENST00000438413 MTX1Q13505 466 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
MUC1-211ENST00000438413 DPF3Q92784 378 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
MUC1-211ENST00000438413 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.66■■□□□ 1.38
MUC1-211ENST00000438413 RHBDL3P58872 404 aa23.65■■□□□ 1.38
MUC1-211ENST00000438413 CCDC84Q86UT8 332 aaPredicted RBP23.65■■□□□ 1.38
MUC1-211ENST00000438413 ZNF384Q8TF68 577 aa23.65■■□□□ 1.38
MUC1-211ENST00000438413 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
MUC1-211ENST00000438413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.65■■□□□ 1.38
MUC1-211ENST00000438413 UBE2Q1Q7Z7E8 422 aa23.64■■□□□ 1.37
MUC1-211ENST00000438413 HMG20BQ9P0W2 317 aa23.64■■□□□ 1.37
MUC1-211ENST00000438413 TNPO2O14787 897 aaKnown RBP23.63■■□□□ 1.37
MUC1-211ENST00000438413 ADCY3O60266 1144 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 TBC1D12O60347 775 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 NPM3O75607 178 aaKnown RBP23.63■■□□□ 1.37
MUC1-211ENST00000438413 FLT3LGP49771 235 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 CHRDL2Q6WN34 429 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 SPATA5Q8NB90 893 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 U2AF1L4Q8WU68 220 aaKnown RBP23.63■■□□□ 1.37
MUC1-211ENST00000438413 HTATIP2Q9BUP3 242 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.63■■□□□ 1.37
MUC1-211ENST00000438413 AGTPBP1Q9UPW5 1226 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 LOC285556D6RIA3 1793 aa23.63■■□□□ 1.37
MUC1-211ENST00000438413 FAM196BA6NMK8 535 aa23.62■■□□□ 1.37
MUC1-211ENST00000438413 GSTO1P78417 241 aa23.62■■□□□ 1.37
MUC1-211ENST00000438413 GORABQ5T7V8 394 aa23.62■■□□□ 1.37
MUC1-211ENST00000438413 PI16Q6UXB8 463 aa23.62■■□□□ 1.37
MUC1-211ENST00000438413 NSUN4Q96CB9 384 aaKnown RBP23.62■■□□□ 1.37
MUC1-211ENST00000438413 UNC93B1Q9H1C4 597 aa23.62■■□□□ 1.37
MUC1-211ENST00000438413 COL2A1P02458 1487 aaPredicted RBP23.62■■□□□ 1.37
MUC1-211ENST00000438413 LDHCP07864 332 aa23.61■■□□□ 1.37
MUC1-211ENST00000438413 ELNP15502 786 aa23.61■■□□□ 1.37
MUC1-211ENST00000438413 TBC1D9Q6ZT07 1266 aa23.61■■□□□ 1.37
MUC1-211ENST00000438413 MAP4K4O95819 1239 aaPredicted RBP23.6■■□□□ 1.37
MUC1-211ENST00000438413 ARID4AP29374 1257 aaPredicted RBP23.6■■□□□ 1.37
MUC1-211ENST00000438413 TREML2Q5T2D2 321 aa23.6■■□□□ 1.37
MUC1-211ENST00000438413 ANKRD13CQ8N6S4 541 aa23.6■■□□□ 1.37
MUC1-211ENST00000438413 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
MUC1-211ENST00000438413 OSBPL5Q9H0X9 879 aaPredicted RBP23.6■■□□□ 1.37
MUC1-211ENST00000438413 RAI14Q9P0K7 980 aa23.6■■□□□ 1.37
MUC1-211ENST00000438413 PNMA3Q9UL41 463 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms