RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 NECAB2Q7Z6G3 386 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 PRRT2Q7Z6L0 340 aaPredicted RBP17.62■□□□□ 0.41
LINC01088-201ENST00000437737 WDR63Q8IWG1 891 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 SCYL3Q8IZE3 742 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 KLHDC4Q8TBB5 520 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 PAK6Q9NQU5 681 aaPredicted RBP17.62■□□□□ 0.41
LINC01088-201ENST00000437737 USP40Q9NVE5 1235 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 DOCK3Q8IZD9 2030 aa17.62■□□□□ 0.41
LINC01088-201ENST00000437737 SLC5A1P13866 664 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 ANKRD44Q8N8A2 993 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 COA7Q96BR5 231 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 COL6A3P12111 3177 aa17.61■□□□□ 0.41
LINC01088-201ENST00000437737 PTPRAP18433 802 aa17.6■□□□□ 0.41
LINC01088-201ENST00000437737 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
LINC01088-201ENST00000437737 DEFB123Q8N688 67 aa17.6■□□□□ 0.41
LINC01088-201ENST00000437737 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
LINC01088-201ENST00000437737 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
LINC01088-201ENST00000437737 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC01088-201ENST00000437737 ZMYND8Q9ULU4 1186 aaPredicted RBP17.6■□□□□ 0.41
LINC01088-201ENST00000437737 UTYO14607 1347 aa17.6■□□□□ 0.41
LINC01088-201ENST00000437737 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 PHIPQ8WWQ0 1821 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
LINC01088-201ENST00000437737 FGFR2P21802 821 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 PRDX5P30044 214 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 BMP8BP34820 402 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 GPR153Q6NV75 609 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
LINC01088-201ENST00000437737 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 GDF15Q99988 308 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
LINC01088-201ENST00000437737 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
LINC01088-201ENST00000437737 PHF20L1A8MW92 1017 aa17.58■□□□□ 0.4
LINC01088-201ENST00000437737 Q7L0L9 218 aa17.58■□□□□ 0.4
LINC01088-201ENST00000437737 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.4
LINC01088-201ENST00000437737 ATRNL1Q5VV63 1379 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 RGS3P49796 1198 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 ANKLE1Q8NAG6 615 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 LPIN2Q92539 896 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
LINC01088-201ENST00000437737 LAMA3Q16787 3333 aa17.56■□□□□ 0.4
LINC01088-201ENST00000437737 SYN1P17600 705 aa17.56■□□□□ 0.4
LINC01088-201ENST00000437737 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
LINC01088-201ENST00000437737 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
LINC01088-201ENST00000437737 CUL9Q8IWT3 2517 aa17.56■□□□□ 0.4
LINC01088-201ENST00000437737 EYA2O00167 538 aa17.55■□□□□ 0.4
LINC01088-201ENST00000437737 ENTPD3O75355 529 aa17.55■□□□□ 0.4
LINC01088-201ENST00000437737 HMGCRP04035 888 aa17.55■□□□□ 0.4
LINC01088-201ENST00000437737 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
LINC01088-201ENST00000437737 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
LINC01088-201ENST00000437737 GNL3LQ9NVN8 582 aaKnown RBP17.55■□□□□ 0.4
LINC01088-201ENST00000437737 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
LINC01088-201ENST00000437737 LRIT3Q3SXY7 679 aa17.54■□□□□ 0.4
LINC01088-201ENST00000437737 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
LINC01088-201ENST00000437737 TDHQ8IZJ6 230 aa17.54■□□□□ 0.4
LINC01088-201ENST00000437737 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
LINC01088-201ENST00000437737 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
LINC01088-201ENST00000437737 HMX1Q9NP08 348 aaPredicted RBP17.54■□□□□ 0.4
LINC01088-201ENST00000437737 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.54■□□□□ 0.4
LINC01088-201ENST00000437737 SALL1Q9NSC2 1324 aa17.53■□□□□ 0.4
LINC01088-201ENST00000437737 MAGEA10P43363 369 aaPredicted RBP17.53■□□□□ 0.4
LINC01088-201ENST00000437737 PICALMQ13492 652 aa17.53■□□□□ 0.4
LINC01088-201ENST00000437737 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
LINC01088-201ENST00000437737 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
LINC01088-201ENST00000437737 RPTORQ8N122 1335 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 ATAD5Q96QE3 1844 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 DDTLA6NHG4 134 aaPredicted RBP17.52■□□□□ 0.4
LINC01088-201ENST00000437737 SLURP2P0DP57 97 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 ATP2B3Q16720 1220 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 UBE2OQ9C0C9 1292 aaKnown RBP17.52■□□□□ 0.4
LINC01088-201ENST00000437737 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
LINC01088-201ENST00000437737 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
LINC01088-201ENST00000437737 TRIM32Q13049 653 aa17.51■□□□□ 0.39
LINC01088-201ENST00000437737 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
LINC01088-201ENST00000437737 ZGPATQ8N5A5 531 aaKnown RBP17.51■□□□□ 0.39
LINC01088-201ENST00000437737 SEMA3EO15041 775 aa17.5■□□□□ 0.39
LINC01088-201ENST00000437737 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
LINC01088-201ENST00000437737 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
LINC01088-201ENST00000437737 MAP3K10Q02779 954 aa17.5■□□□□ 0.39
LINC01088-201ENST00000437737 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
LINC01088-201ENST00000437737 SIL1Q9H173 461 aa17.5■□□□□ 0.39
LINC01088-201ENST00000437737 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
LINC01088-201ENST00000437737 GAKO14976 1311 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 BTDP43251 543 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 PHKA1P46020 1223 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 PABPC4Q13310 644 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■□□□□ 10.4
LINC01088-201ENST00000437737 ATG9AQ7Z3C6 839 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 SLF2Q8IX21 1173 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
LINC01088-201ENST00000437737 USP44Q9H0E7 712 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms