RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 GPTP24298 496 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 ZRSR1Q15695 479 aaKnown RBP5.88□□□□□ -1.47
RIF1-203ENST00000428287 EGFL6Q8IUX8 553 aa5.88□□□□□ -1.47
RIF1-203ENST00000428287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.88□□□□□ -1.47
RIF1-203ENST00000428287 ITGB4P16144 1822 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 NFAT5O94916 1531 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 RASSF9O75901 435 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 CCDC175P0C221 793 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 MAPK8IP2Q13387 824 aaPredicted RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 PTPAQ15257 358 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 WLSQ5T9L3 541 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 CERS3Q8IU89 383 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 NOA1Q8NC60 698 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 LINS1Q8NG48 757 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 FTOQ9C0B1 505 aaKnown RBP eCLIP5.87□□□□□ -1.47
RIF1-203ENST00000428287 CBFA2T2O43439 604 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 SPATS2Q86XZ4 545 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 FAXDC2Q96IV6 333 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
RIF1-203ENST00000428287 PCDHA5Q9Y5H7 936 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 WDR19Q8NEZ3 1342 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 ARHGAP23Q9P227 1491 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 ERCC5P28715 1186 aaPredicted RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 HNRNPH1P31943 449 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 HSP90B2PQ58FF3 399 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 CNPY4Q8N129 248 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 MICALL1Q8N3F8 863 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 ADD3Q9UEY8 706 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 RREB1Q92766 1687 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 PALLDQ8WX93 1383 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 SPTLC2O15270 562 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 CHGAP10645 457 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 SKOR1P84550 965 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 SAFB2Q14151 953 aaKnown RBP eCLIP5.87□□□□□ -1.471e-6■■□□□ 11.8
RIF1-203ENST00000428287 ZNF589Q86UQ0 364 aaPredicted RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 TCEANC2Q96MN5 208 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 SH3TC1Q8TE82 1336 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 PRR36Q9H6K5 1346 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 KIAA1551Q9HCM1 1747 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 PI4KAP2A4QPH2 592 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 TOP1P11387 765 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 FDPSP14324 419 aaKnown RBP5.87□□□□□ -1.47
RIF1-203ENST00000428287 CRYMQ14894 314 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 PI4KAP1Q8N8J0 262 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 MLKLQ8NB16 471 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 MIEF2Q96C03 454 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 FANCLQ9NW38 375 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 GRIN2DO15399 1336 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 RAI14Q9P0K7 980 aa5.87□□□□□ -1.47
RIF1-203ENST00000428287 SPTBP11277 2137 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 LRRIQ3A6PVS8 624 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 SMTNP53814 917 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 MTHFSDQ2M296 383 aaKnown RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 STOX1Q6ZVD7 989 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 STK26Q9P289 416 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 N4BP1O75113 896 aaKnown RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 PPP6R2O75170 966 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 FAM169AQ9Y6X4 670 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 ITIH6Q6UXX5 1313 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 ARHGAP25P42331 645 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CFAP100Q494V2 611 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 GGT6Q6P531 493 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 TBC1D22AQ8WUA7 517 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 DPF2Q92785 391 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CCDC51Q96ER9 411 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CDHR2Q9BYE9 1310 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 PLEKHG1Q9ULL1 1385 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 MCM3P25205 808 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CDKAL1Q5VV42 579 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 RCSD1Q6JBY9 416 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 POTEDQ86YR6 584 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 KBTBD3Q8NAB2 608 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CABS1Q96KC9 395 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 FAM204AQ9H8W3 233 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 MRPL44Q9H9J2 332 aaKnown RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 ZRANB1Q9UGI0 708 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 TIAM2Q8IVF5 1701 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 GRM8O00222 908 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 DTNBO60941 627 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 ERLIN2O94905 339 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 TRAPPC11Q7Z392 1133 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 BANK1Q8NDB2 785 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 ABCB6Q9NP58 842 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 TOMM22Q9NS69 142 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 VPS18Q9P253 973 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 CTAGE9A4FU28 777 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 MDM2Q00987 491 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 XRCC4Q13426 336 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 MAP9Q49MG5 647 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 PREPLQ4J6C6 727 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 ERCC4Q92889 916 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 CCDC34Q96HJ3 373 aa5.86□□□□□ -1.47
RIF1-203ENST00000428287 U3KPZ7 1027 aaPredicted RBP5.86□□□□□ -1.47
RIF1-203ENST00000428287 MAP4K4O95819 1239 aaPredicted RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 NEDD9Q14511 834 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 PLCB4Q15147 1175 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 WHAMMP3Q1A5X7 153 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms