RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 MCOLN1Q9GZU1 580 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 MANSC4A6NHS7 340 aaPredicted RBP15.61■□□□□ 0.09
GPC1-204ENST00000426280 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
GPC1-204ENST00000426280 GPR25O00155 361 aa15.61■□□□□ 0.09
GPC1-204ENST00000426280 DGKZQ13574 1117 aa15.61■□□□□ 0.09
GPC1-204ENST00000426280 RRP1BQ14684 758 aaKnown RBP15.61■□□□□ 0.09
GPC1-204ENST00000426280 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
GPC1-204ENST00000426280 EDC3Q96F86 508 aaKnown RBP15.61■□□□□ 0.09
GPC1-204ENST00000426280 ZNF341Q9BYN7 854 aa15.61■□□□□ 0.09
GPC1-204ENST00000426280 AATFQ9NY61 560 aaKnown RBP eCLIP15.61■□□□□ 0.09
GPC1-204ENST00000426280 PCDHB15Q9Y5E8 787 aa15.61■□□□□ 0.09
GPC1-204ENST00000426280 SPDYE5A6NIY4 337 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 IRF6O14896 467 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 LDHCP07864 332 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 MAP3K10Q02779 954 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 SLFNL1Q499Z3 407 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 NAA16Q6N069 864 aaPredicted RBP15.6■□□□□ 0.09
GPC1-204ENST00000426280 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 SLF2Q8IX21 1173 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 KIF1BPQ96EK5 621 aa15.6■□□□□ 0.09
GPC1-204ENST00000426280 HMMRO75330 724 aa15.59■□□□□ 0.09
GPC1-204ENST00000426280 CHGBP05060 677 aa15.59■□□□□ 0.09
GPC1-204ENST00000426280 GSTO1P78417 241 aa15.59■□□□□ 0.09
GPC1-204ENST00000426280 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
GPC1-204ENST00000426280 CSADQ9Y600 493 aa15.59■□□□□ 0.09
GPC1-204ENST00000426280 CYP7A1P22680 504 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 INHBEP58166 350 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 PPP4CP60510 307 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 MOGSQ13724 837 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 HSP90AB4PQ58FF6 505 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 DCAF15Q66K64 600 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 ERO1BQ86YB8 467 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 ZSCAN29Q8IWY8 852 aaPredicted RBP15.58■□□□□ 0.08
GPC1-204ENST00000426280 CRBNQ96SW2 442 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 CFHR5Q9BXR6 569 aa15.58■□□□□ 0.08
GPC1-204ENST00000426280 SUPT16HQ9Y5B9 1047 aaKnown RBP15.58■□□□□ 0.08
GPC1-204ENST00000426280 LAMB1P07942 1786 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 RAB11FIP3O75154 756 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 IDH1O75874 414 aaKnown RBP15.57■□□□□ 0.08
GPC1-204ENST00000426280 JAG1P78504 1218 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 CRHR2Q13324 411 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 CCL15Q16663 113 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 TEX11Q8IYF3 940 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 CLASRPQ8N2M8 674 aaKnown RBP15.57■□□□□ 0.08
GPC1-204ENST00000426280 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 TGFBRAP1Q8WUH2 860 aa15.57■□□□□ 0.08
GPC1-204ENST00000426280 OSBPL5Q9H0X9 879 aaPredicted RBP15.57■□□□□ 0.08
GPC1-204ENST00000426280 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
GPC1-204ENST00000426280 SHROOM1Q2M3G4 852 aaPredicted RBP15.56■□□□□ 0.08
GPC1-204ENST00000426280 NOL9Q5SY16 702 aaKnown RBP15.56■□□□□ 0.08
GPC1-204ENST00000426280 MAPKAPK5Q8IW41 473 aa15.56■□□□□ 0.08
GPC1-204ENST00000426280 DCTPP1Q9H773 170 aa15.56■□□□□ 0.08
GPC1-204ENST00000426280 AK9Q5TCS8 1911 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 BTBD19C9JJ37 291 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
GPC1-204ENST00000426280 GTF2A2P52657 109 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 EVX2Q03828 476 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 PPATQ06203 517 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 PPIL2Q13356 520 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 SLC4A8Q2Y0W8 1093 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 HOOK2Q96ED9 719 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 DNAJC2Q99543 621 aaKnown RBP15.55■□□□□ 0.08
GPC1-204ENST00000426280 BOLA2Q9H3K6 86 aa15.55■□□□□ 0.08
GPC1-204ENST00000426280 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
GPC1-204ENST00000426280 GOLIM4O00461 696 aa15.54■□□□□ 0.08
GPC1-204ENST00000426280 PTPRAP18433 802 aa15.54■□□□□ 0.08
GPC1-204ENST00000426280 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
GPC1-204ENST00000426280 SAP30BPQ9UHR5 308 aaKnown RBP15.54■□□□□ 0.08
GPC1-204ENST00000426280 PALD1Q9ULE6 856 aa15.54■□□□□ 0.08
GPC1-204ENST00000426280 FLT1P17948 1338 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 SIPA1L1O43166 1804 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 DOCK2Q92608 1830 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 TCRBV5S4A2TA0A5A2 114 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 CCDC85CA6NKD9 419 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 TBC1D12O60347 775 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 FKTNO75072 461 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 BAG3O95817 575 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 ALDH1A1P00352 501 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
GPC1-204ENST00000426280 TSHZ3Q63HK5 1081 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 GPAT2Q6NUI2 795 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 CTU1Q7Z7A3 348 aaKnown RBP15.53■□□□□ 0.08
GPC1-204ENST00000426280 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.53■□□□□ 0.08
GPC1-204ENST00000426280 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
GPC1-204ENST00000426280 LRRCC1Q9C099 1032 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 KCNH4Q9UQ05 1017 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 ZHX2Q9Y6X8 837 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 MAST2Q6P0Q8 1798 aa15.53■□□□□ 0.08
GPC1-204ENST00000426280 MAP4K4O95819 1239 aaPredicted RBP15.52■□□□□ 0.08
GPC1-204ENST00000426280 PDE6AP16499 860 aa15.52■□□□□ 0.08
GPC1-204ENST00000426280 ATP5JP18859 108 aa15.52■□□□□ 0.08
GPC1-204ENST00000426280 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.08
GPC1-204ENST00000426280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms