RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NF2P35240 595 aa29.47■■■□□ 2.31
VEGFA-209ENST00000425836 SEC62Q99442 399 aaKnown RBP29.47■■■□□ 2.31
VEGFA-209ENST00000425836 CRNKL1Q9BZJ0 848 aaKnown RBP29.47■■■□□ 2.31
VEGFA-209ENST00000425836 FLT1P17948 1338 aa29.47■■■□□ 2.31
VEGFA-209ENST00000425836 M0R2C6 588 aa29.47■■■□□ 2.31
VEGFA-209ENST00000425836 STRBPQ96SI9 672 aaKnown RBP29.47■■■□□ 2.31
VEGFA-209ENST00000425836 GBA2Q9HCG7 927 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-209ENST00000425836 DDTLA6NHG4 134 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-209ENST00000425836 USP5P45974 858 aa29.46■■■□□ 2.31
VEGFA-209ENST00000425836 SSC5DA1L4H1 1573 aa29.46■■■□□ 2.31
VEGFA-209ENST00000425836 PRKAB2O43741 272 aa29.45■■■□□ 2.31
VEGFA-209ENST00000425836 ZSCAN29Q8IWY8 852 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-209ENST00000425836 CREBZFQ9NS37 354 aa29.45■■■□□ 2.31
VEGFA-209ENST00000425836 C2orf69Q8N8R5 385 aa29.44■■■□□ 2.3
VEGFA-209ENST00000425836 SDR42E1Q8WUS8 393 aa29.44■■■□□ 2.3
VEGFA-209ENST00000425836 FAM227BQ96M60 508 aa29.44■■■□□ 2.3
VEGFA-209ENST00000425836 GPAA1O43292 621 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 NMIQ13287 307 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-209ENST00000425836 PRKG1Q13976 671 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 HELLSQ9NRZ9 838 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 MKRN1Q9UHC7 482 aaKnown RBP29.43■■■□□ 2.3
VEGFA-209ENST00000425836 FZD1Q9UP38 647 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 ATRNL1Q5VV63 1379 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 A0A0D9SFI3 127 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 MOB2Q70IA6 237 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 CSRNP1Q96S65 589 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 SLC4A4Q9Y6R1 1079 aa29.43■■■□□ 2.3
VEGFA-209ENST00000425836 FKBP1BP68106 108 aa29.42■■■□□ 2.3
VEGFA-209ENST00000425836 HTRA3P83110 453 aa29.42■■■□□ 2.3
VEGFA-209ENST00000425836 SAP30BPQ9UHR5 308 aaKnown RBP29.42■■■□□ 2.3
VEGFA-209ENST00000425836 TTLL12Q14166 644 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-209ENST00000425836 HOOK2Q96ED9 719 aa29.41■■■□□ 2.3
VEGFA-209ENST00000425836 DCP1AQ9NPI6 582 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-209ENST00000425836 PALD1Q9ULE6 856 aa29.41■■■□□ 2.3
VEGFA-209ENST00000425836 TLL2Q9Y6L7 1015 aa29.41■■■□□ 2.3
VEGFA-209ENST00000425836 MYH7P12883 1935 aa29.41■■■□□ 2.3
VEGFA-209ENST00000425836 COL2A1P02458 1487 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-209ENST00000425836 HIP1O00291 1037 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 PPP1R12BO60237 982 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-209ENST00000425836 BMP2KLQ5H9B9 411 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 CCDC129Q6ZRS4 1044 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 MIGA2Q7L4E1 593 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 SAPCD2Q86UD0 394 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 DHX36Q9H2U1 1008 aaKnown RBP29.4■■■□□ 2.3
VEGFA-209ENST00000425836 DIAPH3Q9NSV4 1193 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 ATP8A2Q9NTI2 1148 aa29.4■■■□□ 2.3
VEGFA-209ENST00000425836 ABT1Q9ULW3 272 aaKnown RBP29.4■■■□□ 2.3
VEGFA-209ENST00000425836 USP2O75604 605 aaPredicted RBP29.39■■■□□ 2.3
VEGFA-209ENST00000425836 MCMDC2Q4G0Z9 681 aa29.39■■■□□ 2.3
VEGFA-209ENST00000425836 UBE2Q2LH0YL09 131 aa29.39■■■□□ 2.29
VEGFA-209ENST00000425836 ARMC9Q7Z3E5 817 aa29.39■■■□□ 2.29
VEGFA-209ENST00000425836 ANGEL1Q9UNK9 670 aaKnown RBP29.39■■■□□ 2.29
VEGFA-209ENST00000425836 GNAT2P19087 354 aa29.38■■■□□ 2.29
VEGFA-209ENST00000425836 MAP3K11Q16584 847 aa29.38■■■□□ 2.29
VEGFA-209ENST00000425836 CWC27Q6UX04 472 aaKnown RBP29.38■■■□□ 2.29
VEGFA-209ENST00000425836 GSG1L2A8MUP6 293 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 SLURP2P0DP57 97 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 HUNKP57058 714 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 MAP3K10Q02779 954 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 DCAF15Q66K64 600 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 MCM9Q9NXL9 1143 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 TRPM7Q96QT4 1865 aa29.37■■■□□ 2.29
VEGFA-209ENST00000425836 PI4KBQ9UBF8 816 aa29.36■■■□□ 2.29
VEGFA-209ENST00000425836 PATL2C9JE40 543 aaKnown RBP29.35■■■□□ 2.29
VEGFA-209ENST00000425836 CHMLP26374 656 aa29.35■■■□□ 2.29
VEGFA-209ENST00000425836 SLC4A8Q2Y0W8 1093 aa29.35■■■□□ 2.29
VEGFA-209ENST00000425836 LDLRAD1Q5T700 205 aa29.35■■■□□ 2.29
VEGFA-209ENST00000425836 ZNF589Q86UQ0 364 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-209ENST00000425836 KLRG1Q96E93 195 aa29.35■■■□□ 2.29
VEGFA-209ENST00000425836 IREB2P48200 963 aaKnown RBP29.35■■■□□ 2.29
VEGFA-209ENST00000425836 ZNF341Q9BYN7 854 aa29.35■■■□□ 2.29
VEGFA-209ENST00000425836 PAPPA2Q9BXP8 1791 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 TBC1D12O60347 775 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 HLA-DOAP06340 250 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 GIMAP6Q6P9H5 292 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 TTC6Q86TZ1 520 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 DDRGK1Q96HY6 314 aa29.34■■■□□ 2.29
VEGFA-209ENST00000425836 RASSF10A6NK89 507 aa29.33■■■□□ 2.29
VEGFA-209ENST00000425836 APPP05067 770 aa29.33■■■□□ 2.29
VEGFA-209ENST00000425836 POLR3DP05423 398 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-209ENST00000425836 PLCD1P51178 756 aa29.33■■■□□ 2.29
VEGFA-209ENST00000425836 FOXP4Q8IVH2 680 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-209ENST00000425836 EPB41L4AQ9HCS5 686 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-209ENST00000425836 FOXP2O15409 715 aa29.32■■■□□ 2.28
VEGFA-209ENST00000425836 VPS53Q5VIR6 699 aa29.32■■■□□ 2.28
VEGFA-209ENST00000425836 METTL16Q86W50 562 aaKnown RBP29.32■■■□□ 2.28
VEGFA-209ENST00000425836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.32■■■□□ 2.281e-6■□□□□ 11.1
VEGFA-209ENST00000425836 HHIPL1Q96JK4 782 aa29.32■■■□□ 2.28
VEGFA-209ENST00000425836 GTF3C3Q9Y5Q9 886 aa29.32■■■□□ 2.28
VEGFA-209ENST00000425836 FAM196BA6NMK8 535 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 USP17L12C9JPN9 530 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 USP17L21D6R901 530 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 CYP2D6P10635 497 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 MAP3K9P80192 1104 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 EVX2Q03828 476 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 DEFB115Q30KQ5 88 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 CTR9Q6PD62 1173 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 CCDC171Q6TFL3 1326 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 IFNL3Q8IZI9 196 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.31■■■□□ 2.283e-7■■■■■ 34.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms