RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 GJA5P36382 358 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 MAP3K10Q02779 954 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 NOM1Q5C9Z4 860 aaKnown RBP22.52■■□□□ 1.2
MSH5-207ENST00000425703 MIGA2Q7L4E1 593 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 ERO1BQ86YB8 467 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 DCTPP1Q9H773 170 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 SNCAIPQ9Y6H5 919 aa22.52■■□□□ 1.2
MSH5-207ENST00000425703 OTOFQ9HC10 1997 aa22.51■■□□□ 1.19
MSH5-207ENST00000425703 TTF1Q15361 905 aaPredicted RBP22.51■■□□□ 1.19
MSH5-207ENST00000425703 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
MSH5-207ENST00000425703 COL2A1P02458 1487 aaPredicted RBP22.51■■□□□ 1.19
MSH5-207ENST00000425703 MAP3K12Q12852 859 aa22.5■■□□□ 1.19
MSH5-207ENST00000425703 PICALMQ13492 652 aa22.5■■□□□ 1.19
MSH5-207ENST00000425703 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
MSH5-207ENST00000425703 IFNL1Q8IU54 200 aa22.5■■□□□ 1.19
MSH5-207ENST00000425703 ZSCAN29Q8IWY8 852 aaPredicted RBP22.5■■□□□ 1.19
MSH5-207ENST00000425703 ZKSCAN4Q969J2 545 aaPredicted RBP22.5■■□□□ 1.19
MSH5-207ENST00000425703 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.5■■□□□ 1.19
MSH5-207ENST00000425703 MAST2Q6P0Q8 1798 aa22.5■■□□□ 1.19
MSH5-207ENST00000425703 LAMB1P07942 1786 aa22.49■■□□□ 1.19
MSH5-207ENST00000425703 DDTLA6NHG4 134 aaPredicted RBP22.49■■□□□ 1.19
MSH5-207ENST00000425703 IDH1O75874 414 aaKnown RBP22.49■■□□□ 1.19
MSH5-207ENST00000425703 GTF2A2P52657 109 aa22.49■■□□□ 1.19
MSH5-207ENST00000425703 NOL9Q5SY16 702 aaKnown RBP22.49■■□□□ 1.19
MSH5-207ENST00000425703 OTUD7BQ6GQQ9 843 aa22.49■■□□□ 1.19
MSH5-207ENST00000425703 TEX11Q8IYF3 940 aa22.49■■□□□ 1.19
MSH5-207ENST00000425703 MS4A4AQ96JQ5 239 aa22.49■■□□□ 1.19
MSH5-207ENST00000425703 AATFQ9NY61 560 aaKnown RBP eCLIP22.49■■□□□ 1.19
MSH5-207ENST00000425703 TBC1D12O60347 775 aa22.48■■□□□ 1.19
MSH5-207ENST00000425703 PPATQ06203 517 aa22.48■■□□□ 1.19
MSH5-207ENST00000425703 PPIL2Q13356 520 aa22.48■■□□□ 1.19
MSH5-207ENST00000425703 ADGRA1Q86SQ6 560 aa22.48■■□□□ 1.19
MSH5-207ENST00000425703 OSBPL5Q9H0X9 879 aaPredicted RBP22.48■■□□□ 1.19
MSH5-207ENST00000425703 ANTXR1Q9H6X2 564 aa22.48■■□□□ 1.19
MSH5-207ENST00000425703 IGF2BP3O00425 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
MSH5-207ENST00000425703 ATP5JP18859 108 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 CYP7A1P22680 504 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 INPP5BP32019 993 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 SH3RF3Q8TEJ3 882 aaPredicted RBP22.47■■□□□ 1.19
MSH5-207ENST00000425703 CNKSR2Q8WXI2 1034 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 OTUD5Q96G74 571 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 PCDHB15Q9Y5E8 787 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 NDUFB9Q9Y6M9 179 aa22.47■■□□□ 1.19
MSH5-207ENST00000425703 PHF20L1A8MW92 1017 aa22.46■■□□□ 1.19
MSH5-207ENST00000425703 TBC1D8O95759 1140 aa22.46■■□□□ 1.19
MSH5-207ENST00000425703 AAMPQ13685 434 aa22.46■■□□□ 1.19
MSH5-207ENST00000425703 MAGEB6Q8N7X4 407 aa22.46■■□□□ 1.19
MSH5-207ENST00000425703 DHX36Q9H2U1 1008 aaKnown RBP22.46■■□□□ 1.19
MSH5-207ENST00000425703 PTPN18Q99952 460 aa22.45■■□□□ 1.18
MSH5-207ENST00000425703 IRF6O14896 467 aa22.44■■□□□ 1.18
MSH5-207ENST00000425703 CETPP11597 493 aa22.44■■□□□ 1.18
MSH5-207ENST00000425703 SNAPC2Q13487 334 aa22.44■■□□□ 1.18
MSH5-207ENST00000425703 BRI3BPQ8WY22 251 aa22.44■■□□□ 1.18
MSH5-207ENST00000425703 CCL15-CCL14A0A0B4J2E2 113 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 GPR25O00155 361 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 CTNND1O60716 968 aaKnown RBP22.43■■□□□ 1.18
MSH5-207ENST00000425703 CCL15Q16663 113 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 SCYL3Q8IZE3 742 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 CRBNQ96SW2 442 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
MSH5-207ENST00000425703 HAUS7Q99871 368 aa22.43■■□□□ 1.18
MSH5-207ENST00000425703 ZCCHC17Q9NP64 241 aaKnown RBP22.43■■□□□ 1.18
MSH5-207ENST00000425703 HERC5Q9UII4 1024 aaKnown RBP22.43■■□□□ 1.18
MSH5-207ENST00000425703 FLT1P17948 1338 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 GOLIM4O00461 696 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 TGFBRAP1Q8WUH2 860 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 ZNF296Q8WUU4 475 aaPredicted RBP22.42■■□□□ 1.18
MSH5-207ENST00000425703 PAG1Q9NWQ8 432 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 PI4KBQ9UBF8 816 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 KCNH4Q9UQ05 1017 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 DOCK2Q92608 1830 aa22.42■■□□□ 1.18
MSH5-207ENST00000425703 AK9Q5TCS8 1911 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 SMARCA5O60264 1052 aaPredicted RBP22.41■■□□□ 1.18
MSH5-207ENST00000425703 PDE6AP16499 860 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 SLC9C2Q5TAH2 1124 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 BOLA2Q9H3K6 86 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.41■■□□□ 1.18
MSH5-207ENST00000425703 PICK1Q9NRD5 415 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 ECHDC1Q9NTX5 307 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 CASP8AP2Q9UKL3 1982 aa22.41■■□□□ 1.18
MSH5-207ENST00000425703 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
MSH5-207ENST00000425703 METTL16Q86W50 562 aaKnown RBP22.4■■□□□ 1.18
MSH5-207ENST00000425703 MAPKAPK5Q8IW41 473 aa22.4■■□□□ 1.18
MSH5-207ENST00000425703 MIGA1Q8NAN2 632 aa22.4■■□□□ 1.18
MSH5-207ENST00000425703 R3HDMLQ9H3Y0 253 aa22.4■■□□□ 1.18
MSH5-207ENST00000425703 CXCL11O14625 94 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 FKTNO75072 461 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 PTPRAP18433 802 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 DGKZQ13574 1117 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 CTU1Q7Z7A3 348 aaKnown RBP22.39■■□□□ 1.17
MSH5-207ENST00000425703 FOXP4Q8IVH2 680 aaPredicted RBP22.39■■□□□ 1.17
MSH5-207ENST00000425703 GPATCH3Q96I76 525 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 RIOK1Q9BRS2 568 aaKnown RBP22.39■■□□□ 1.17
MSH5-207ENST00000425703 MCOLN1Q9GZU1 580 aa22.39■■□□□ 1.17
MSH5-207ENST00000425703 MYO5AQ9Y4I1 1855 aaKnown RBP22.39■■□□□ 1.17
MSH5-207ENST00000425703 CRHR2Q13324 411 aa22.38■■□□□ 1.17
MSH5-207ENST00000425703 HDAC1Q13547 482 aaPredicted RBP22.38■■□□□ 1.17
MSH5-207ENST00000425703 ABHD8Q96I13 439 aa22.38■■□□□ 1.17
MSH5-207ENST00000425703 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.38■■□□□ 1.178e-12■■■■■ 31.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms