RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 TDO2P48775 406 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 HIRAP54198 1017 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
HDLBP-209ENST00000422933 PGAP2Q9UHJ9 254 aa11.93□□□□□ -0.5
HDLBP-209ENST00000422933 REC8O95072 547 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 EGFRP00533 1210 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 RHBDL3P58872 404 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 TCP10Q12799 353 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 MAPKAPK5Q8IW41 473 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
HDLBP-209ENST00000422933 NAPBQ9H115 298 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 ZNF287Q9HBT7 754 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 CTNNA3Q9UI47 895 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 PCDHAC2Q9Y5I4 1007 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 MYH1P12882 1939 aa11.92□□□□□ -0.5
HDLBP-209ENST00000422933 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 M0R2C6 588 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 PPP1R12BO60237 982 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-209ENST00000422933 CACNB3P54284 484 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 RASA3Q14644 834 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-209ENST00000422933 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 CRACR2BQ8N4Y2 399 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-209ENST00000422933 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
HDLBP-209ENST00000422933 MCM9Q9NXL9 1143 aa11.91□□□□□ -0.5
HDLBP-209ENST00000422933 ARPP21Q9UBL0 812 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-209ENST00000422933 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-209ENST00000422933 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-209ENST00000422933 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
HDLBP-209ENST00000422933 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
HDLBP-209ENST00000422933 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-209ENST00000422933 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
HDLBP-209ENST00000422933 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
HDLBP-209ENST00000422933 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
HDLBP-209ENST00000422933 FLT1P17948 1338 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 SGSM2O43147 1006 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 MCCP23508 829 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 CCDC129Q6ZRS4 1044 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-209ENST00000422933 IFNL3Q8IZI9 196 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 DSCC1Q9BVC3 393 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-209ENST00000422933 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
HDLBP-209ENST00000422933 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-209ENST00000422933 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-209ENST00000422933 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
HDLBP-209ENST00000422933 ASTN2O75129 1339 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 PRKAB2O43741 272 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 CHGBP05060 677 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 NFIAQ12857 509 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 ALX1Q15699 326 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 IMMTQ16891 758 aaKnown RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 RNF20Q5VTR2 975 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 TMEM39BQ9GZU3 492 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
HDLBP-209ENST00000422933 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 SAP30BPQ9UHR5 308 aaKnown RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-209ENST00000422933 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 USP17L21D6R901 530 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 ZNF213O14771 459 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 IREB2P48200 963 aaKnown RBP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 FKBP1BP68106 108 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 PDE4BQ07343 736 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 SBK1Q52WX2 424 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 RNF41Q9H4P4 317 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
HDLBP-209ENST00000422933 BAZ2AQ9UIF9 1905 aaKnown RBP11.87□□□□□ -0.51
HDLBP-209ENST00000422933 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms