RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SREBF2Q12772 1141 aa32.14■■■□□ 2.74
CDK9-202ENST00000421939 MAP3K12Q12852 859 aa32.14■■■□□ 2.74
CDK9-202ENST00000421939 TTF1Q15361 905 aaPredicted RBP32.14■■■□□ 2.74
CDK9-202ENST00000421939 ZSCAN29Q8IWY8 852 aaPredicted RBP32.14■■■□□ 2.74
CDK9-202ENST00000421939 TEX11Q8IYF3 940 aa32.14■■■□□ 2.74
CDK9-202ENST00000421939 DNAJC2Q99543 621 aaKnown RBP32.14■■■□□ 2.74
CDK9-202ENST00000421939 ATRNL1Q5VV63 1379 aa32.14■■■□□ 2.74
CDK9-202ENST00000421939 LAMB1P07942 1786 aa32.13■■■□□ 2.73
CDK9-202ENST00000421939 PLCG2P16885 1265 aa32.13■■■□□ 2.73
CDK9-202ENST00000421939 CYP7A1P22680 504 aa32.13■■■□□ 2.73
CDK9-202ENST00000421939 SH3BP5LQ7L8J4 393 aa32.13■■■□□ 2.73
CDK9-202ENST00000421939 SH3RF3Q8TEJ3 882 aaPredicted RBP32.13■■■□□ 2.73
CDK9-202ENST00000421939 ATP5JP18859 108 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 GJA5P36382 358 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 PPP4CP60510 307 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 TMED8Q6PL24 325 aaPredicted RBP32.12■■■□□ 2.73
CDK9-202ENST00000421939 MAGEB6Q8N7X4 407 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 OPTNQ96CV9 577 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 RNF186Q9NXI6 227 aa32.12■■■□□ 2.73
CDK9-202ENST00000421939 COL2A1P02458 1487 aaPredicted RBP32.11■■■□□ 2.73
CDK9-202ENST00000421939 GOLIM4O00461 696 aa32.11■■■□□ 2.73
CDK9-202ENST00000421939 TM4SF4P48230 202 aa32.11■■■□□ 2.73
CDK9-202ENST00000421939 SNCAIPQ9Y6H5 919 aa32.11■■■□□ 2.73
CDK9-202ENST00000421939 DDTLA6NHG4 134 aaPredicted RBP32.1■■■□□ 2.73
CDK9-202ENST00000421939 MANSC4A6NHS7 340 aaPredicted RBP32.1■■■□□ 2.73
CDK9-202ENST00000421939 TRPA1O75762 1119 aa32.1■■■□□ 2.73
CDK9-202ENST00000421939 AAMPQ13685 434 aa32.1■■■□□ 2.73
CDK9-202ENST00000421939 BOLA2Q9H3K6 86 aa32.1■■■□□ 2.73
CDK9-202ENST00000421939 ZKSCAN4Q969J2 545 aaPredicted RBP32.09■■■□□ 2.73
CDK9-202ENST00000421939 OSBPL5Q9H0X9 879 aaPredicted RBP32.09■■■□□ 2.73
CDK9-202ENST00000421939 ZNF112Q9UJU3 913 aa32.09■■■□□ 2.73
CDK9-202ENST00000421939 CNKSR2Q8WXI2 1034 aa32.08■■■□□ 2.73
CDK9-202ENST00000421939 HAUS7Q99871 368 aa32.08■■■□□ 2.73
CDK9-202ENST00000421939 PAG1Q9NWQ8 432 aa32.08■■■□□ 2.73
CDK9-202ENST00000421939 SUPT16HQ9Y5B9 1047 aaKnown RBP32.08■■■□□ 2.73
CDK9-202ENST00000421939 SPDYE5A6NIY4 337 aa32.07■■■□□ 2.72
CDK9-202ENST00000421939 INPP5BP32019 993 aa32.07■■■□□ 2.72
CDK9-202ENST00000421939 EDC3Q96F86 508 aaKnown RBP32.07■■■□□ 2.72
CDK9-202ENST00000421939 CDK5RAP2Q96SN8 1893 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 FOCADQ5VW36 1801 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 INHBEP58166 350 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 CERS3Q8IU89 383 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 MIGA1Q8NAN2 632 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 OTUD5Q96G74 571 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 GPATCH3Q96I76 525 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 ECHDC1Q9NTX5 307 aa32.06■■■□□ 2.72
CDK9-202ENST00000421939 PDE6AP16499 860 aa32.05■■■□□ 2.72
CDK9-202ENST00000421939 DYNLL1P63167 89 aaKnown RBP32.05■■■□□ 2.72
CDK9-202ENST00000421939 HDAC1Q13547 482 aaPredicted RBP32.05■■■□□ 2.72
CDK9-202ENST00000421939 ERO1BQ86YB8 467 aa32.05■■■□□ 2.72
CDK9-202ENST00000421939 MAP3K10Q02779 954 aa32.04■■■□□ 2.72
CDK9-202ENST00000421939 SLC9C2Q5TAH2 1124 aa32.04■■■□□ 2.72
CDK9-202ENST00000421939 TGFBRAP1Q8WUH2 860 aa32.04■■■□□ 2.72
CDK9-202ENST00000421939 FLT1P17948 1338 aa32.03■■■□□ 2.72
CDK9-202ENST00000421939 NOL9Q5SY16 702 aaKnown RBP32.03■■■□□ 2.72
CDK9-202ENST00000421939 MAPKAPK5Q8IW41 473 aa32.03■■■□□ 2.72
CDK9-202ENST00000421939 EXOC6Q8TAG9 804 aa32.03■■■□□ 2.72
CDK9-202ENST00000421939 PHF20L1A8MW92 1017 aa32.02■■■□□ 2.72
CDK9-202ENST00000421939 TNS4Q8IZW8 715 aa32.02■■■□□ 2.72
CDK9-202ENST00000421939 IFNL1Q8IU54 200 aa32.01■■■□□ 2.71
CDK9-202ENST00000421939 ZNF532Q9HCE3 1301 aa32■■■□□ 2.71
CDK9-202ENST00000421939 TBC1D12O60347 775 aa32■■■□□ 2.71
CDK9-202ENST00000421939 SLURP2P0DP57 97 aa32■■■□□ 2.71
CDK9-202ENST00000421939 GTF2A2P52657 109 aa32■■■□□ 2.71
CDK9-202ENST00000421939 PPIL2Q13356 520 aa32■■■□□ 2.71
CDK9-202ENST00000421939 GCC1Q96CN9 775 aa32■■■□□ 2.71
CDK9-202ENST00000421939 MS4A4AQ96JQ5 239 aa32■■■□□ 2.71
CDK9-202ENST00000421939 TESPA1A2RU30 521 aaPredicted RBP31.99■■■□□ 2.71
CDK9-202ENST00000421939 IGF2BP3O00425 579 aaKnown RBP eCLIP31.99■■■□□ 2.71
CDK9-202ENST00000421939 ALDH1A1P00352 501 aa31.99■■■□□ 2.71
CDK9-202ENST00000421939 TSHZ3Q63HK5 1081 aa31.99■■■□□ 2.71
CDK9-202ENST00000421939 RIOK1Q9BRS2 568 aaKnown RBP31.99■■■□□ 2.71
CDK9-202ENST00000421939 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.99■■■□□ 2.715e-7■■□□□ 11.5
CDK9-202ENST00000421939 DHX36Q9H2U1 1008 aaKnown RBP31.99■■■□□ 2.71
CDK9-202ENST00000421939 TCRBV5S4A2TA0A5A2 114 aa31.98■■■□□ 2.71
CDK9-202ENST00000421939 PPATQ06203 517 aa31.98■■■□□ 2.71
CDK9-202ENST00000421939 CASP8AP2Q9UKL3 1982 aa31.98■■■□□ 2.71
CDK9-202ENST00000421939 MAGEB6P1A0A0J9YX57 407 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 SCYL3Q8IZE3 742 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 BRI3BPQ8WY22 251 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 CFHR5Q9BXR6 569 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.97■■■□□ 2.71
CDK9-202ENST00000421939 ZBTB47Q9UFB7 747 aaPredicted RBP31.97■■■□□ 2.71
CDK9-202ENST00000421939 SIPA1L1O43166 1804 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 DOCK1Q14185 1865 aa31.97■■■□□ 2.71
CDK9-202ENST00000421939 MYH7P12883 1935 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 CCL15-CCL14A0A0B4J2E2 113 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 FAM196BA6NMK8 535 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 IRF6O14896 467 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 TBC1D8O95759 1140 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 ADD2P35612 726 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 USP5P45974 858 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 CCL15Q16663 113 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 PICK1Q9NRD5 415 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 PI4KBQ9UBF8 816 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 HERC5Q9UII4 1024 aaKnown RBP31.96■■■□□ 2.71
CDK9-202ENST00000421939 TTC41PQ6P2S7 1318 aa31.96■■■□□ 2.71
CDK9-202ENST00000421939 SNAPC2Q13487 334 aa31.95■■■□□ 2.71
CDK9-202ENST00000421939 ANKRD45Q5TZF3 282 aa31.95■■■□□ 2.71
CDK9-202ENST00000421939 OTUD7BQ6GQQ9 843 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms