RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ATP8A2Q9NTI2 1148 aa14.34□□□□□ -0.11
ATG4B-207ENST00000415107 RAD50Q92878 1312 aa14.34□□□□□ -0.11
ATG4B-207ENST00000415107 TRAF5O00463 557 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 GPAA1O43292 621 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 MBD4O95243 580 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 CHGBP05060 677 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 NF2P35240 595 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 APLP1P51693 650 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
ATG4B-207ENST00000415107 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
ATG4B-207ENST00000415107 TMEM39BQ9GZU3 492 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 ZMYM6O95789 1325 aa14.33□□□□□ -0.12
ATG4B-207ENST00000415107 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 M0R2C6 588 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 TBC1D12O60347 775 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 CST9Q5W186 159 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 EHD4Q9H223 541 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-207ENST00000415107 CREBZFQ9NS37 354 aa14.32□□□□□ -0.12
ATG4B-207ENST00000415107 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 TMEM88BA6NKF7 163 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 CELF2O95319 508 aaKnown RBP14.31□□□□□ -0.12
ATG4B-207ENST00000415107 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
ATG4B-207ENST00000415107 NBPF12Q5TAG4 269 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-207ENST00000415107 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-207ENST00000415107 DIAPH3Q9NSV4 1193 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 MYH1P12882 1939 aa14.31□□□□□ -0.12
ATG4B-207ENST00000415107 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-207ENST00000415107 HSPA6P17066 643 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 CHMLP26374 656 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 USP5P45974 858 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 TCP10Q12799 353 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-207ENST00000415107 PICALMQ13492 652 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 CSRNP1Q96S65 589 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
ATG4B-207ENST00000415107 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 HERC5Q9UII4 1024 aaKnown RBP14.3□□□□□ -0.12
ATG4B-207ENST00000415107 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
ATG4B-207ENST00000415107 LAMB1P07942 1786 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-207ENST00000415107 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 PATL2C9JE40 543 aaKnown RBP14.29□□□□□ -0.12
ATG4B-207ENST00000415107 ALX1Q15699 326 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SBK1Q52WX2 424 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SKAP1Q86WV1 359 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 MAPKAPK5Q8IW41 473 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 CDAN1Q8IWY9 1227 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SDR42E1Q8WUS8 393 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 RUFY2Q8WXA3 655 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 DDRGK1Q96HY6 314 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-207ENST00000415107 ZNF112Q9UJU3 913 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
ATG4B-207ENST00000415107 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 ROBO3Q96MS0 1386 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
ATG4B-207ENST00000415107 FOXP2O15409 715 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 GABPAQ06546 454 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
ATG4B-207ENST00000415107 LDLRAD1Q5T700 205 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 DLK2Q6UY11 383 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 ARMC9Q7Z3E5 817 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-207ENST00000415107 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-207ENST00000415107 C2orf69Q8N8R5 385 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
ATG4B-207ENST00000415107 KLRG1Q96E93 195 aa14.28□□□□□ -0.12
ATG4B-207ENST00000415107 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-207ENST00000415107 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
ATG4B-207ENST00000415107 RASSF10A6NK89 507 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 SGSM2O43147 1006 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 PRKAB2O43741 272 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.13
ATG4B-207ENST00000415107 NOL9Q5SY16 702 aaKnown RBP14.27□□□□□ -0.13
ATG4B-207ENST00000415107 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 CWC27Q6UX04 472 aaKnown RBP14.27□□□□□ -0.13
ATG4B-207ENST00000415107 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 NACAP1Q9BZK3 213 aa14.27□□□□□ -0.13
ATG4B-207ENST00000415107 BAZ2AQ9UIF9 1905 aaKnown RBP14.26□□□□□ -0.13
ATG4B-207ENST00000415107 CDC45O75419 566 aa14.26□□□□□ -0.13
ATG4B-207ENST00000415107 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-207ENST00000415107 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
ATG4B-207ENST00000415107 ZSCAN29Q8IWY8 852 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-207ENST00000415107 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
ATG4B-207ENST00000415107 IFNL3Q8IZI9 196 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms