RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 FBXL6Q8N531 539 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 TBC1D32Q96NH3 1257 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 USP31Q70CQ4 1352 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 KIAA1324LA8MWY0 1029 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 MED26O95402 600 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 CELA3AP09093 270 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 RLBP1P12271 317 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 SSTR4P31391 388 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 RING1Q06587 406 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 TTLL4Q14679 1199 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 TAF1CQ15572 869 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 XP32Q5T750 250 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 RASIP1Q5U651 963 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 PCNX4Q63HM2 1172 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 MPRIPQ6WCQ1 1025 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 ACSBG1Q96GR2 724 aa6.43□□□□□ -1.38
HMGB3P23-201ENST00000414981 SORBS3O60504 671 aa6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 TTBK2Q6IQ55 1244 aa6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 SHISA5Q8N114 240 aa6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 NOC4LQ9BVI4 516 aaKnown RBP6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 PCMTD2Q9NV79 361 aa6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 DAGLAQ9Y4D2 1042 aa6.42□□□□□ -1.38
HMGB3P23-201ENST00000414981 FANCGO15287 622 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 RNGTTO60942 597 aaKnown RBP6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 CTSHP09668 335 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 FOSL1P15407 271 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 ZNF326Q5BKZ1 582 aaKnown RBP6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 NBPF11Q86T75 865 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
HMGB3P23-201ENST00000414981 DYNC1LI2O43237 492 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 TMCO4Q5TGY1 634 aa6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 AGMOQ6ZNB7 445 aa6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 SNCAIPQ9Y6H5 919 aa6.4□□□□□ -1.38
HMGB3P23-201ENST00000414981 FAM170BA6NMN3 283 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 NEFMP07197 916 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 HCLS1P14317 486 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 SPINK2P20155 84 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 PTPN11Q06124 597 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 MEI1Q5TIA1 1274 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 C12orf40Q86WS4 652 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 KCT2Q8NC54 265 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 ISL2Q96A47 359 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 FAM161BQ96MY7 647 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
HMGB3P23-201ENST00000414981 DCDC2CA8MYV0 355 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 CYP26A1O43174 497 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 LMNB1P20700 586 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 HOXA10P31260 410 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 LIG3P49916 1009 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 INPP5AQ14642 412 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 PPM1JQ5JR12 505 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 HDXQ7Z353 690 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 CRELD1Q96HD1 420 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 BCL2L13Q9BXK5 485 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 CSADQ9Y600 493 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
HMGB3P23-201ENST00000414981 NTF4P34130 210 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 MSMPQ1L6U9 139 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 ZBTB37Q5TC79 503 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 ZNF765Q7L2R6 523 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 CDC37L1Q7L3B6 337 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 CCDC84Q86UT8 332 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 GAL3ST3Q96A11 431 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 ELMO3Q96BJ8 720 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 RSRP1Q9BUV0 290 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 BCL11AQ9H165 835 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 PICK1Q9NRD5 415 aa6.37□□□□□ -1.39
HMGB3P23-201ENST00000414981 GFRA2O00451 464 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 WNT11O96014 354 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 PRNPP04156 253 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 CDK5R2Q13319 367 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 LRFN4Q6PJG9 635 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 VTI1BQ9UEU0 232 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 PCDHB5Q9Y5E4 795 aa6.36□□□□□ -1.39
HMGB3P23-201ENST00000414981 FAM87AP0C7U9 286 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 TFE3P19532 575 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 DIEXFQ68CQ4 756 aaKnown RBP6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 PLPPR2Q96GM1 343 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms