RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NELFCDQ8IXH7 590 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 TRPC6Q9Y210 931 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 ARHGEF35A5YM69 484 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 SLFN5Q08AF3 891 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 USP48Q86UV5 1035 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 ARFGAP3Q9NP61 516 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 RBBP5Q15291 538 aaKnown RBP20.63■□□□□ 0.89
SHANK3-202ENST00000414786 ARHGAP44Q17R89 818 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 LRPPRCP42704 1394 aaKnown RBP20.63■□□□□ 0.89
SHANK3-202ENST00000414786 SLC12A2P55011 1212 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 GANCQ8TET4 914 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 RILPQ96NA2 401 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 ARHGEF10LQ9HCE6 1279 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 NKIRAS1Q9NYS0 192 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 TRAF1Q13077 416 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 CWF19L2Q2TBE0 894 aaKnown RBP20.63■□□□□ 0.89
SHANK3-202ENST00000414786 PRDM1O75626 825 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 MYCT1Q8N699 235 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 SCYL1Q96KG9 808 aa20.63■□□□□ 0.89
SHANK3-202ENST00000414786 TFCP2Q12800 502 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 SV2BQ7L1I2 683 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 HP1BP3Q5SSJ5 553 aaPredicted RBP20.62■□□□□ 0.89
SHANK3-202ENST00000414786 NOC4LQ9BVI4 516 aaKnown RBP20.62■□□□□ 0.89
SHANK3-202ENST00000414786 CASQ2O14958 399 aaPredicted RBP20.62■□□□□ 0.89
SHANK3-202ENST00000414786 KRT86O43790 486 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 ZSCAN23Q3MJ62 389 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 LCA5Q86VQ0 697 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 CNBD1Q8NA66 436 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 TBC1D8O95759 1140 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 RARSP54136 660 aaKnown RBP20.62■□□□□ 0.89
SHANK3-202ENST00000414786 MYLK4Q86YV6 388 aaPredicted RBP20.62■□□□□ 0.89
SHANK3-202ENST00000414786 PPP1R16BQ96T49 567 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 ARMT1Q9H993 441 aa20.62■□□□□ 0.89
SHANK3-202ENST00000414786 GCNT3O95395 438 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHANK3-202ENST00000414786 TAF5LO75529 589 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 PDE4DQ08499 809 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 RABGAP1Q9Y3P9 1069 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 CAPN9O14815 690 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 FBXW4P57775 412 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 PRR16Q569H4 304 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 NBPF3Q9H094 633 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 UBE2HP62256 183 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 MRPS27Q92552 414 aaKnown RBP20.61■□□□□ 0.89
SHANK3-202ENST00000414786 CDCA7Q9BWT1 371 aaPredicted RBP20.61■□□□□ 0.89
SHANK3-202ENST00000414786 TESPA1A2RU30 521 aaPredicted RBP20.61■□□□□ 0.89
SHANK3-202ENST00000414786 MBD4O95243 580 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 IFNKQ9P0W0 207 aa20.61■□□□□ 0.89
SHANK3-202ENST00000414786 MSH6P52701 1360 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 TNNI1P19237 187 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 SKIV2LQ15477 1246 aaKnown RBP20.6■□□□□ 0.89
SHANK3-202ENST00000414786 ACBD5Q5T8D3 534 aaPredicted RBP20.6■□□□□ 0.89
SHANK3-202ENST00000414786 ZNF365Q70YC5 407 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 CD2APQ9Y5K6 639 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 TRIM27P14373 513 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 RHPN1Q8TCX5 695 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 MOSPD1Q9UJG1 213 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 CDR2Q01850 454 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 SMYD2Q9NRG4 433 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 ASIC3Q9UHC3 531 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 SWAP70Q9UH65 585 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 SMIM24O75264 130 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 APBA3O96018 575 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 ALKBH8Q96BT7 664 aaKnown RBP20.6■□□□□ 0.89
SHANK3-202ENST00000414786 MEIS3Q99687 375 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 BICDL2A1A5D9 508 aa20.6■□□□□ 0.89
SHANK3-202ENST00000414786 ZSCAN22P10073 491 aaPredicted RBP20.6■□□□□ 0.89
SHANK3-202ENST00000414786 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
SHANK3-202ENST00000414786 SYT10Q6XYQ8 523 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 CCNL1Q9UK58 526 aaPredicted RBP20.59■□□□□ 0.89
SHANK3-202ENST00000414786 GSTA1P08263 222 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 GSTA2P09210 222 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 FAM98CQ17RN3 349 aaKnown RBP20.59■□□□□ 0.89
SHANK3-202ENST00000414786 LIN9Q5TKA1 542 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 KLHL7Q8IXQ5 586 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 MRPL46Q9H2W6 279 aaKnown RBP20.59■□□□□ 0.89
SHANK3-202ENST00000414786 CCDC171Q6TFL3 1326 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 H0YIN7 160 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 ZBED4O75132 1171 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 DNM2P50570 870 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 KRT83P78385 493 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 PDCD7Q8N8D1 485 aaKnown RBP20.59■□□□□ 0.89
SHANK3-202ENST00000414786 SPDYE1Q8NFV5 336 aaPredicted RBP20.59■□□□□ 0.89
SHANK3-202ENST00000414786 FAM102BQ5T8I3 360 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 SPC25Q9HBM1 224 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 B4E1Z4 1266 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 PCK1P35558 622 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
SHANK3-202ENST00000414786 GPR161Q8N6U8 529 aaKnown RBP20.58■□□□□ 0.89
SHANK3-202ENST00000414786 PRPF38AQ8NAV1 312 aaKnown RBP20.58■□□□□ 0.89
SHANK3-202ENST00000414786 ASIC2Q16515 512 aa20.58■□□□□ 0.89
SHANK3-202ENST00000414786 ZBTB33Q86T24 672 aa20.58■□□□□ 0.89
SHANK3-202ENST00000414786 NCAPG2Q86XI2 1143 aa20.58■□□□□ 0.89
SHANK3-202ENST00000414786 TMX3Q96JJ7 454 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms