RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ADD2P35612 726 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 HUNKP57058 714 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-202ENST00000412686 TTF1Q15361 905 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-202ENST00000412686 SLC9C2Q5TAH2 1124 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 TEX11Q8IYF3 940 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 C2orf69Q8N8R5 385 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 KLRG1Q96E93 195 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 ANGEL1Q9UNK9 670 aaKnown RBP9.36□□□□□ -0.91
CPSF4-202ENST00000412686 PPP2R3BQ9Y5P8 575 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 RPAP1Q9BWH6 1393 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-202ENST00000412686 DDTLA6NHG4 134 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 GLRX3O76003 335 aaKnown RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 NF2P35240 595 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 VEGFBP49765 207 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 PPP4CP60510 307 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 DEFB115Q30KQ5 88 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 DDX60LQ5H9U9 1706 aaKnown RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 FKBP1CQ5VVH2 108 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 MIGA2Q7L4E1 593 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 MAPKAPK5Q8IW41 473 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 LCORLQ8N3X6 602 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 KBTBD3Q8NAB2 608 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 NAV1Q8NEY1 1877 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 FAM151AQ8WW52 585 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 ZIC5Q96T25 663 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 RIOK1Q9BRS2 568 aaKnown RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
CPSF4-202ENST00000412686 IDI2Q9BXS1 227 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 STAP2Q9UGK3 403 aa9.35□□□□□ -0.91
CPSF4-202ENST00000412686 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 ERC2O15083 957 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 AOC2O75106 756 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 USP2O75604 605 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-202ENST00000412686 BAG3O95817 575 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 NEFLP07196 543 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 SUPT20HL1Q3ZLR7 823 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 RGMBQ6NW40 437 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 ZSCAN29Q8IWY8 852 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-202ENST00000412686 CLMNQ96JQ2 1002 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 PUS7LQ9H0K6 701 aaKnown RBP9.34□□□□□ -0.91
CPSF4-202ENST00000412686 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-202ENST00000412686 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 ATRNL1Q5VV63 1379 aa9.34□□□□□ -0.91
CPSF4-202ENST00000412686 FLT1P17948 1338 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 WDR33Q9C0J8 1336 aaKnown RBP9.33□□□□□ -0.92
CPSF4-202ENST00000412686 MYH1P12882 1939 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 MAGEB6P1A0A0J9YX57 407 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 PRKAB2O43741 272 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 ENTPD3O75355 529 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 MBD4O95243 580 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 EVX2Q03828 476 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
CPSF4-202ENST00000412686 ARMC9Q7Z3E5 817 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 RASAL3Q86YV0 1011 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 SDR42E1Q8WUS8 393 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 CSRNP1Q96S65 589 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 SEC62Q99442 399 aaKnown RBP9.33□□□□□ -0.92
CPSF4-202ENST00000412686 FSD1Q9BTV5 496 aa9.33□□□□□ -0.92
CPSF4-202ENST00000412686 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPSF4-202ENST00000412686 SAP30BPQ9UHR5 308 aaKnown RBP9.33□□□□□ -0.92
CPSF4-202ENST00000412686 FAM155AB1AL88 458 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 M0R2C6 588 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 IGSF3O75054 1194 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 PLCG2P16885 1265 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 INPP5BP32019 993 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 USP5P45974 858 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 FKBP1BP68106 108 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 UBE3CQ15386 1083 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 MAP3K11Q16584 847 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 LDLRAD1Q5T700 205 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 OSBP2Q969R2 916 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 HHIPL1Q96JK4 782 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 OSBPL3Q9H4L5 887 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 PALD1Q9ULE6 856 aa9.32□□□□□ -0.92
CPSF4-202ENST00000412686 BAZ2AQ9UIF9 1905 aaKnown RBP9.32□□□□□ -0.92
CPSF4-202ENST00000412686 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 SMIM22K7EJ46 135 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 RNF113AO15541 343 aaKnown RBP9.31□□□□□ -0.92
CPSF4-202ENST00000412686 SLC10A3P09131 477 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 CYP2D6P10635 497 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 GSPT1P15170 499 aaKnown RBP9.31□□□□□ -0.92
CPSF4-202ENST00000412686 GJA5P36382 358 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 VGLL4Q14135 290 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 ZSCAN25Q6NSZ9 544 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 APPBP2Q92624 585 aa9.31□□□□□ -0.92
CPSF4-202ENST00000412686 ZKSCAN4Q969J2 545 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-202ENST00000412686 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms