RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 NSUN4Q96CB9 384 aaKnown RBP12.35□□□□□ -0.43
PKP4-203ENST00000411900 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
PKP4-203ENST00000411900 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
PKP4-203ENST00000411900 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
PKP4-203ENST00000411900 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
PKP4-203ENST00000411900 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 ENTPD3O75355 529 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 CETPP11597 493 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 RHBDL3P58872 404 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 CAP1Q01518 475 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 MLLT1Q03111 559 aaPredicted RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 PPIL2Q13356 520 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 PKN2Q16513 984 aaKnown RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 ZNF112Q9UJU3 913 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
PKP4-203ENST00000411900 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
PKP4-203ENST00000411900 ATRNL1Q5VV63 1379 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 FAM196BA6NMK8 535 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 APBB1O00213 710 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 LDHCP07864 332 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 ZAP70P43403 619 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 GSTO1P78417 241 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 SP3Q02447 781 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 PPATQ06203 517 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 FBXO46Q6PJ61 603 aaPredicted RBP12.33□□□□□ -0.44
PKP4-203ENST00000411900 OTOP1Q7RTM1 612 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
PKP4-203ENST00000411900 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
PKP4-203ENST00000411900 RCAN3Q9UKA8 241 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
PKP4-203ENST00000411900 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 CYP2E1P05181 493 aaPredicted RBP12.32□□□□□ -0.44
PKP4-203ENST00000411900 RGS19P49795 217 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
PKP4-203ENST00000411900 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
PKP4-203ENST00000411900 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
PKP4-203ENST00000411900 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.441e-7■■□□□ 14.3
PKP4-203ENST00000411900 PHIPQ8WWQ0 1821 aa12.32□□□□□ -0.44
PKP4-203ENST00000411900 MS4A1P11836 297 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 NOL9Q5SY16 702 aaKnown RBP12.31□□□□□ -0.44
PKP4-203ENST00000411900 ADGRA1Q86SQ6 560 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
PKP4-203ENST00000411900 AACSQ86V21 672 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 NOL10Q9BSC4 688 aaKnown RBP12.31□□□□□ -0.44
PKP4-203ENST00000411900 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 FOCADQ5VW36 1801 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 PTPRFP10586 1907 aa12.31□□□□□ -0.44
PKP4-203ENST00000411900 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 HTTP42858 3142 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 ARHGAP39Q9C0H5 1083 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 OSBPL5Q9H0X9 879 aaPredicted RBP12.3□□□□□ -0.44
PKP4-203ENST00000411900 PICK1Q9NRD5 415 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 CENPFP49454 3210 aa12.3□□□□□ -0.44
PKP4-203ENST00000411900 PDHXO00330 501 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
PKP4-203ENST00000411900 PTPRAP18433 802 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 DYNLL1P63167 89 aaKnown RBP12.29□□□□□ -0.44
PKP4-203ENST00000411900 SLC4A8Q2Y0W8 1093 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 ERC1Q8IUD2 1116 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKP4-203ENST00000411900 CPA4Q9UI42 421 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 PTPN22Q9Y2R2 807 aa12.29□□□□□ -0.44
PKP4-203ENST00000411900 TNRC18O15417 2968 aaPredicted RBP12.29□□□□□ -0.44
PKP4-203ENST00000411900 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 TLR2O60603 784 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 BAG3O95817 575 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 CYP7A1P22680 504 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 MOGSQ13724 837 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 ANKRD23Q86SG2 305 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 ZNF512BQ96KM6 892 aaPredicted RBP12.28□□□□□ -0.44
PKP4-203ENST00000411900 ZBTB40Q9NUA8 1239 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
PKP4-203ENST00000411900 MYH1P12882 1939 aa12.28□□□□□ -0.44
PKP4-203ENST00000411900 CTNND1O60716 968 aaKnown RBP12.27□□□□□ -0.45
PKP4-203ENST00000411900 CYP2C8P10632 490 aa12.27□□□□□ -0.45
PKP4-203ENST00000411900 MAP3K10Q02779 954 aa12.27□□□□□ -0.45
PKP4-203ENST00000411900 RRP1BQ14684 758 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms