RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ZMYM1Q5SVZ6 1142 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 NT5DC1Q5TFE4 455 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 NBPF6Q5VWK0 638 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 Q6ZUG5 572 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 DHX32Q7L7V1 743 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 FERMT3Q86UX7 667 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 HNRNPLLQ8WVV9 542 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 MRPS27Q92552 414 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 NBPF4Q96M43 638 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 ZNF396Q96N95 335 aaPredicted RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 NAT10Q9H0A0 1025 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 TFIP11Q9UBB9 837 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 PCDHA7Q9UN72 937 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 PA2G4Q9UQ80 394 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 USP16Q9Y5T5 823 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 CPDO75976 1380 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 MYH3P11055 1940 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 CMA1P23946 247 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PDIA3P30101 505 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 GJA5P36382 358 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 AMPHP49418 695 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 CLK2P49760 499 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 PRSS12P56730 875 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PTPN12Q05209 780 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 FAM69CQ0P6D2 419 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 LRRFIP1Q32MZ4 808 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 MCMDC2Q4G0Z9 681 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 TNNI3KQ59H18 835 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 BRAPQ7Z569 592 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 FILIP1Q7Z7B0 1213 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 VSTM4Q8IW00 320 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 KBTBD3Q8NAB2 608 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 INTS13Q9NVM9 706 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 RAB21Q9UL25 225 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 HPS5Q9UPZ3 1129 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 FPGT-TNNI3KV9GXZ4 949 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 V9GYY5 206 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 WDR17Q8IZU2 1322 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 C1orf167Q5SNV9 1468 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 KIAA1551Q9HCM1 1747 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 TOGARAM1Q9Y4F4 1720 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 STRCQ7RTU9 1775 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 DISP2A7MBM2 1401 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 TNS2Q63HR2 1409 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 MROH7-TTC4A0A0A0MT08 1334 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PTPDC1A2A3K4 754 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 VWA3AA6NCI4 1184 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PPP6R2O75170 966 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 ZNF18P17022 549 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 GCKRQ14397 625 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PTPAQ15257 358 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 DIXDC1Q155Q3 683 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 DPCR1Q3MIW9 517 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 EPHA10Q5JZY3 1008 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 VARS2Q5ST30 1063 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 PPP2R2DQ66LE6 453 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 PADI6Q6TGC4 694 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 ZNF771Q7L3S4 317 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 AOPEPQ8N6M6 819 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 KCNG4Q8TDN1 519 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 MPHOSPH8Q99549 860 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 METTL22Q9BUU2 404 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 XPO4Q9C0E2 1151 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 USTQ9Y2C2 406 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 MRFAP1Q9Y605 127 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 MYH2Q9UKX2 1941 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 ABCA3Q99758 1704 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 GOLGA6L19H0YKK7 550 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 SASH3O75995 380 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 CSB-PGBD3P0DP91 1061 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 NDUFA8P51970 172 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 LSM11P83369 360 aaKnown RBP eCLIP3.64□□□□□ -1.83
CUL3-204ENST00000409777 ERCC6LQ2NKX8 1250 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 CT47A1Q5JQC4 288 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 CC2D1AQ6P1N0 951 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 ATG9AQ7Z3C6 839 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 MB21D2Q8IYB1 491 aaPredicted RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 GPR161Q8N6U8 529 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 MSANTD4Q8NCY6 345 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 SPATA20Q8TB22 786 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 BICD2Q8TD16 824 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 DNAJC2Q99543 621 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 MAP3K14Q99558 947 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 NOL10Q9BSC4 688 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 FUT8Q9BYC5 575 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.64□□□□□ -1.83
CUL3-204ENST00000409777 ST7Q9NRC1 585 aa3.64□□□□□ -1.83
CUL3-204ENST00000409777 ZMYM6O95789 1325 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 RBM47A0AV96 593 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 GOLGA6L9A6NEM1 432 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 BTBD11A6QL63 1104 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 KINO60870 393 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 GPR37L1O60883 481 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 PBX1P40424 430 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 SARSP49591 514 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 CWF19L2Q2TBE0 894 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 RESP18Q5W5W9 173 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 CCDC73Q6ZRK6 1079 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 APTXQ7Z2E3 356 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 ARHGEF25Q86VW2 580 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms