RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 NOS3P29474 1203 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 NTF4P34130 210 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 MBTPS1Q14703 1052 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 HP1BP3Q5SSJ5 553 aaPredicted RBP10.11□□□□□ -0.79
PTPN12-202ENST00000407343 CYFIP1Q7L576 1253 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 CRIM1Q9NZV1 1036 aa10.11□□□□□ -0.79
PTPN12-202ENST00000407343 FGRP09769 529 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 ADH5P11766 374 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 SOX9P48436 509 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 APOBRQ0VD83 1088 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 WIPI1Q5MNZ9 446 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-202ENST00000407343 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 AKTIPQ9H8T0 292 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
PTPN12-202ENST00000407343 FAM181BA6NEQ2 426 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 DCDC2CA8MYV0 355 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 C9orf172C9J069 976 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 DRD2P14416 443 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 CHRNA4P43681 627 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 DISC1Q9NRI5 854 aa10.09□□□□□ -0.79
PTPN12-202ENST00000407343 PRR36Q9H6K5 1346 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 PREPP48147 710 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 ERVK-24P63145 666 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 ID3Q02535 119 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 SOX4Q06945 474 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-202ENST00000407343 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 NUTM2GQ5VZR2 741 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 C2CD4AQ8NCU7 369 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-202ENST00000407343 NKD1Q969G9 470 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 NACC1Q96RE7 527 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 UBL7Q96S82 380 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-202ENST00000407343 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 HIF3AQ9Y2N7 669 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 SNCAIPQ9Y6H5 919 aa10.08□□□□□ -0.8
PTPN12-202ENST00000407343 ITGB2P05107 769 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 NRG1Q02297 640 aaPredicted RBP10.07□□□□□ -0.8
PTPN12-202ENST00000407343 C12orf40Q86WS4 652 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 MCF2L2Q86YR7 1114 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 FANCD2OSQ96PS1 177 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 USP21Q9UK80 565 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 EFR3BQ9Y2G0 817 aa10.07□□□□□ -0.8
PTPN12-202ENST00000407343 NEFMP07197 916 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 SLFN14P0C7P3 912 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
PTPN12-202ENST00000407343 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 ANKRD34AQ69YU3 496 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 CD163Q86VB7 1156 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 DZIP1LQ8IYY4 767 aaKnown RBP10.06□□□□□ -0.8
PTPN12-202ENST00000407343 FAM46AQ96IP4 442 aaKnown RBP10.06□□□□□ -0.8
PTPN12-202ENST00000407343 SEC16BQ96JE7 1060 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-202ENST00000407343 RAD18Q9NS91 495 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 CORINQ9Y5Q5 1042 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 CSADQ9Y600 493 aa10.06□□□□□ -0.8
PTPN12-202ENST00000407343 APBA3O96018 575 aa10.05□□□□□ -0.8
PTPN12-202ENST00000407343 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
PTPN12-202ENST00000407343 PPM1JQ5JR12 505 aa10.05□□□□□ -0.8
PTPN12-202ENST00000407343 REXO1Q8N1G1 1221 aaKnown RBP10.05□□□□□ -0.8
PTPN12-202ENST00000407343 EHMT1Q9H9B1 1298 aa10.05□□□□□ -0.8
PTPN12-202ENST00000407343 ACTL7BQ9Y614 415 aa10.05□□□□□ -0.8
PTPN12-202ENST00000407343 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
PTPN12-202ENST00000407343 RNF225M0QZC1 329 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-202ENST00000407343 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 ATE1O95260 518 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 BPNT1O95861 308 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 NASPP49321 788 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-202ENST00000407343 ARID5AQ03989 594 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 CLCQ05315 142 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 GNL2Q13823 731 aaKnown RBP10.04□□□□□ -0.8
PTPN12-202ENST00000407343 COL9A2Q14055 689 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-202ENST00000407343 ZBTB37Q5TC79 503 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 HDXQ7Z353 690 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 UBE3DQ7Z6J8 389 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
PTPN12-202ENST00000407343 FAM105AQ9NUU6 356 aa10.04□□□□□ -0.8
PTPN12-202ENST00000407343 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
PTPN12-202ENST00000407343 FDX2Q6P4F2 183 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 TXNRD3Q86VQ6 643 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 C12orf50Q8NA57 414 aaPredicted RBP10.03□□□□□ -0.8
PTPN12-202ENST00000407343 ELMO3Q96BJ8 720 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 PRKAG2Q9UGJ0 569 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 PPT2Q9UMR5 302 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 AP4E1Q9UPM8 1137 aa10.03□□□□□ -0.8
PTPN12-202ENST00000407343 DNAJA2O60884 412 aa10.02□□□□□ -0.81
PTPN12-202ENST00000407343 ARMC10Q8N2F6 343 aa10.02□□□□□ -0.81
PTPN12-202ENST00000407343 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
PTPN12-202ENST00000407343 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
PTPN12-202ENST00000407343 ZNRF3Q9ULT6 936 aa10.02□□□□□ -0.81
PTPN12-202ENST00000407343 IGSF3O75054 1194 aa10.01□□□□□ -0.81
PTPN12-202ENST00000407343 GLB1P16278 677 aa10.01□□□□□ -0.81
PTPN12-202ENST00000407343 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTPN12-202ENST00000407343 RASSF7Q02833 373 aa10.01□□□□□ -0.81
PTPN12-202ENST00000407343 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms