RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 STX10O60499 249 aa16.83■□□□□ 0.29
CCNF-202ENST00000397066 AFMP43652 599 aa16.83■□□□□ 0.29
CCNF-202ENST00000397066 SART3Q15020 963 aaKnown RBP16.83■□□□□ 0.29
CCNF-202ENST00000397066 JAKMIP3Q5VZ66 844 aa16.83■□□□□ 0.29
CCNF-202ENST00000397066 NUTM2AQ8IVF1 878 aaPredicted RBP16.83■□□□□ 0.28
CCNF-202ENST00000397066 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
CCNF-202ENST00000397066 PARD6BQ9BYG5 372 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
CCNF-202ENST00000397066 RAI14Q9P0K7 980 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 VGLL3A8MV65 326 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 BTBD18B2RXH4 712 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 CDC27P30260 824 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 KIF6Q6ZMV9 814 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 DHX58Q96C10 678 aa16.83■□□□□ 0.28
CCNF-202ENST00000397066 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCNF-202ENST00000397066 PES1O00541 588 aaKnown RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 GPTP24298 496 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 IRX5P78411 483 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 PDE4BQ07343 736 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 MYO1BO43795 1136 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 AKR1B15C9JRZ8 316 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 ZKSCAN3Q9BRR0 538 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 GYS2P54840 703 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
CCNF-202ENST00000397066 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.82■□□□□ 0.28
CCNF-202ENST00000397066 SH2B2O14492 632 aaPredicted RBP16.81■□□□□ 0.28
CCNF-202ENST00000397066 ERLIN1O75477 346 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 CHMP4BP1P59074 171 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 HSP90B2PQ58FF3 399 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 NOSTRINQ8IVI9 506 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
CCNF-202ENST00000397066 ZNF569Q5MCW4 686 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 TMEM87BQ96K49 555 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 INCENPQ9NQS7 918 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 FAM53CQ9NYF3 392 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 TDO2P48775 406 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 LEKR1Q6ZMV7 388 aa16.81■□□□□ 0.28
CCNF-202ENST00000397066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCNF-202ENST00000397066 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 TOM1L2Q6ZVM7 507 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 CMTR1Q8N1G2 835 aaKnown RBP16.8■□□□□ 0.28
CCNF-202ENST00000397066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCNF-202ENST00000397066 ATF3P18847 181 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 ST5P78524 1137 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 IGSF22Q8N9C0 903 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 CEP131Q9UPN4 1083 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 HPSEQ9Y251 543 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 MRC1P22897 1456 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 ZNF532Q9HCE3 1301 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 ATP8B1O43520 1251 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 FBXL16Q8N461 479 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 IRX2Q9BZI1 471 aaPredicted RBP16.8■□□□□ 0.28
CCNF-202ENST00000397066 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
CCNF-202ENST00000397066 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 PTPAQ15257 358 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 HSD3B7Q9H2F3 369 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 SOWAHDA6NJG2 315 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 ZRANB2O95218 330 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCNF-202ENST00000397066 RTN1Q16799 776 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
CCNF-202ENST00000397066 GOLGA6L1Q8N7Z2 621 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 VPS18Q9P253 973 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 EIF3JO75822 258 aaKnown RBP16.79■□□□□ 0.28
CCNF-202ENST00000397066 RHOXF2BP0C7M4 288 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 PRR29P0C7W0 189 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 MFSD6Q6ZSS7 791 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 RHOXF2Q9BQY4 288 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 NEDD4P46934 1319 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCNF-202ENST00000397066 MTF1Q14872 753 aa16.79■□□□□ 0.28
CCNF-202ENST00000397066 TXLNAP40222 546 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 LONRF2Q1L5Z9 754 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 TC2NQ8N9U0 490 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 A0A0G2JS52 829 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 ANKRD18BA2A2Z9 1011 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 MCAMP43121 646 aa16.78■□□□□ 0.28
CCNF-202ENST00000397066 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms