RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 LCORLQ8N3X6 602 aa23.13■■□□□ 1.29
HOXA9-202ENST00000396345 DNAJC5GQ8N7S2 189 aa23.13■■□□□ 1.29
HOXA9-202ENST00000396345 AIDAQ96BJ3 306 aa23.13■■□□□ 1.29
HOXA9-202ENST00000396345 CRNKL1Q9BZJ0 848 aaKnown RBP23.13■■□□□ 1.29
HOXA9-202ENST00000396345 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
HOXA9-202ENST00000396345 USP5P45974 858 aa23.12■■□□□ 1.29
HOXA9-202ENST00000396345 MAPKAPK5Q8IW41 473 aa23.12■■□□□ 1.29
HOXA9-202ENST00000396345 OSBP2Q969R2 916 aa23.12■■□□□ 1.29
HOXA9-202ENST00000396345 OSBPL5Q9H0X9 879 aaPredicted RBP23.12■■□□□ 1.29
HOXA9-202ENST00000396345 FOCADQ5VW36 1801 aa23.12■■□□□ 1.29
HOXA9-202ENST00000396345 FLT1P17948 1338 aa23.11■■□□□ 1.29
HOXA9-202ENST00000396345 SSC5DA1L4H1 1573 aa23.11■■□□□ 1.29
HOXA9-202ENST00000396345 TTLL12Q14166 644 aaPredicted RBP23.11■■□□□ 1.29
HOXA9-202ENST00000396345 ZMYM1Q5SVZ6 1142 aa23.11■■□□□ 1.29
HOXA9-202ENST00000396345 ZSCAN29Q8IWY8 852 aaPredicted RBP23.11■■□□□ 1.29
HOXA9-202ENST00000396345 HOOK2Q96ED9 719 aa23.11■■□□□ 1.29
HOXA9-202ENST00000396345 ABT1Q9ULW3 272 aaKnown RBP23.11■■□□□ 1.29
HOXA9-202ENST00000396345 SDSP20132 328 aa23.1■■□□□ 1.29
HOXA9-202ENST00000396345 FKBP1BP68106 108 aa23.1■■□□□ 1.29
HOXA9-202ENST00000396345 PRKG1Q13976 671 aa23.1■■□□□ 1.29
HOXA9-202ENST00000396345 SH3BP5LQ7L8J4 393 aa23.1■■□□□ 1.29
HOXA9-202ENST00000396345 DDTLA6NHG4 134 aaPredicted RBP23.09■■□□□ 1.29
HOXA9-202ENST00000396345 M0R2C6 588 aa23.09■■□□□ 1.29
HOXA9-202ENST00000396345 PPP1R12BO60237 982 aaPredicted RBP23.09■■□□□ 1.29
HOXA9-202ENST00000396345 HTRA3P83110 453 aa23.09■■□□□ 1.29
HOXA9-202ENST00000396345 CSRNP1Q96S65 589 aa23.09■■□□□ 1.29
HOXA9-202ENST00000396345 SEC62Q99442 399 aaKnown RBP23.09■■□□□ 1.29
HOXA9-202ENST00000396345 TLL2Q9Y6L7 1015 aa23.09■■□□□ 1.29
HOXA9-202ENST00000396345 PAPPA2Q9BXP8 1791 aa23.09■■□□□ 1.29
HOXA9-202ENST00000396345 MOB2Q70IA6 237 aa23.08■■□□□ 1.29
HOXA9-202ENST00000396345 ARMC9Q7Z3E5 817 aa23.08■■□□□ 1.29
HOXA9-202ENST00000396345 STRBPQ96SI9 672 aaKnown RBP23.08■■□□□ 1.29
HOXA9-202ENST00000396345 ANGEL1Q9UNK9 670 aaKnown RBP23.08■■□□□ 1.29
HOXA9-202ENST00000396345 FZD1Q9UP38 647 aa23.08■■□□□ 1.29
HOXA9-202ENST00000396345 SLC4A4Q9Y6R1 1079 aa23.08■■□□□ 1.29
HOXA9-202ENST00000396345 ATRNL1Q5VV63 1379 aa23.08■■□□□ 1.29
HOXA9-202ENST00000396345 COL2A1P02458 1487 aaPredicted RBP23.08■■□□□ 1.29
HOXA9-202ENST00000396345 GPAA1O43292 621 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 PRKAB2O43741 272 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 HUNKP57058 714 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 DCAF15Q66K64 600 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 SAPCD2Q86UD0 394 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 DHX36Q9H2U1 1008 aaKnown RBP23.07■■□□□ 1.28
HOXA9-202ENST00000396345 HELLSQ9NRZ9 838 aa23.07■■□□□ 1.28
HOXA9-202ENST00000396345 SAP30BPQ9UHR5 308 aaKnown RBP23.07■■□□□ 1.28
HOXA9-202ENST00000396345 MYH1P12882 1939 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 UBE2Q2LH0YL09 131 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 HIP1O00291 1037 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 USP2O75604 605 aaPredicted RBP23.06■■□□□ 1.28
HOXA9-202ENST00000396345 NMIQ13287 307 aaPredicted RBP23.06■■□□□ 1.28
HOXA9-202ENST00000396345 MIGA2Q7L4E1 593 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 FAM227BQ96M60 508 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 ATP8A2Q9NTI2 1148 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 PALD1Q9ULE6 856 aa23.06■■□□□ 1.28
HOXA9-202ENST00000396345 IREB2P48200 963 aaKnown RBP23.05■■□□□ 1.28
HOXA9-202ENST00000396345 MAP3K11Q16584 847 aa23.05■■□□□ 1.28
HOXA9-202ENST00000396345 DCP1AQ9NPI6 582 aaPredicted RBP23.05■■□□□ 1.28
HOXA9-202ENST00000396345 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
HOXA9-202ENST00000396345 MKRN1Q9UHC7 482 aaKnown RBP23.05■■□□□ 1.28
HOXA9-202ENST00000396345 NAV1Q8NEY1 1877 aa23.05■■□□□ 1.28
HOXA9-202ENST00000396345 A0A0D9SFI3 127 aa23.04■■□□□ 1.28
HOXA9-202ENST00000396345 GNAT2P19087 354 aa23.04■■□□□ 1.28
HOXA9-202ENST00000396345 MCMDC2Q4G0Z9 681 aa23.04■■□□□ 1.28
HOXA9-202ENST00000396345 RASSF10A6NK89 507 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 CCDC129Q6ZRS4 1044 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 HHIPL1Q96JK4 782 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 ZNF341Q9BYN7 854 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 MCM9Q9NXL9 1143 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 PI4KBQ9UBF8 816 aa23.03■■□□□ 1.28
HOXA9-202ENST00000396345 POLR3DP05423 398 aaPredicted RBP23.02■■□□□ 1.28
HOXA9-202ENST00000396345 MAP3K10Q02779 954 aa23.02■■□□□ 1.28
HOXA9-202ENST00000396345 SLC4A8Q2Y0W8 1093 aa23.02■■□□□ 1.28
HOXA9-202ENST00000396345 BMP2KLQ5H9B9 411 aa23.02■■□□□ 1.28
HOXA9-202ENST00000396345 LDLRAD1Q5T700 205 aa23.02■■□□□ 1.28
HOXA9-202ENST00000396345 CWC27Q6UX04 472 aaKnown RBP23.02■■□□□ 1.28
HOXA9-202ENST00000396345 GSG1L2A8MUP6 293 aa23.01■■□□□ 1.27
HOXA9-202ENST00000396345 PATL2C9JE40 543 aaKnown RBP23.01■■□□□ 1.27
HOXA9-202ENST00000396345 APPP05067 770 aa23.01■■□□□ 1.27
HOXA9-202ENST00000396345 PAXIP1Q6ZW49 1069 aaPredicted RBP23.01■■□□□ 1.27
HOXA9-202ENST00000396345 TTC6Q86TZ1 520 aa23.01■■□□□ 1.27
HOXA9-202ENST00000396345 BAZ2AQ9UIF9 1905 aaKnown RBP23■■□□□ 1.27
HOXA9-202ENST00000396345 DDX60LQ5H9U9 1706 aaKnown RBP23■■□□□ 1.27
HOXA9-202ENST00000396345 UNCXA6NJT0 531 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 TBC1D12O60347 775 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 SLURP2P0DP57 97 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 MAP3K9P80192 1104 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 RGMBQ6NW40 437 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 GIMAP6Q6P9H5 292 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 FOXP4Q8IVH2 680 aaPredicted RBP23■■□□□ 1.27
HOXA9-202ENST00000396345 ANKRD13AQ8IZ07 590 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
HOXA9-202ENST00000396345 WRNIP1Q96S55 665 aa23■■□□□ 1.27
HOXA9-202ENST00000396345 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23■■□□□ 1.27
HOXA9-202ENST00000396345 HERC5Q9UII4 1024 aaKnown RBP23■■□□□ 1.27
HOXA9-202ENST00000396345 SIPA1L1O43166 1804 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms