RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 ANAPC15P60006 121 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 USP50Q70EL3 339 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 TGFBRAP1Q8WUH2 860 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 HSPA4P34932 840 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 NT5C2P49902 561 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 KRT32Q14532 448 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
DDX39B-202ENST00000396172 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 EPB41L4AQ9HCS5 686 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-202ENST00000396172 ROBO3Q96MS0 1386 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 PRKAB2O43741 272 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 FGAP02671 866 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 HLA-DOAP06340 250 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 PCP11498 1178 aaKnown RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 EPS15P42566 896 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 RBM25P49756 843 aaKnown RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 PICALMQ13492 652 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 VEZTQ9HBM0 779 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 MCM9Q9NXL9 1143 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 ZNF213O14771 459 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 FOXP2O15409 715 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 EPHX2P34913 555 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 NECTIN1Q15223 517 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 ZNF287Q9HBT7 754 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
DDX39B-202ENST00000396172 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
DDX39B-202ENST00000396172 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 POLR3DP05423 398 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-202ENST00000396172 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
DDX39B-202ENST00000396172 HOOK2Q96ED9 719 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
DDX39B-202ENST00000396172 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-202ENST00000396172 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 SLC27A2O14975 620 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 PPARAQ07869 468 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 FAM151AQ8WW52 585 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 TRDNQ13061 729 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 CTR9Q6PD62 1173 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 KCNB2Q92953 911 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
DDX39B-202ENST00000396172 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
DDX39B-202ENST00000396172 UTRNP46939 3433 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 MINDY4BA8MYZ0 360 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 USP17L12C9JPN9 530 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 USP17L21D6R901 530 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 CYP21A2P08686 494 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-202ENST00000396172 PSMA5P28066 241 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 PDE4BQ07343 736 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 NFIAQ12857 509 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 ZSCAN29Q8IWY8 852 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-202ENST00000396172 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.53
DDX39B-202ENST00000396172 IL17RAQ96F46 866 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 EHD4Q9H223 541 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-202ENST00000396172 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
DDX39B-202ENST00000396172 TCP10L2B9ZVM9 353 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 EGFRP00533 1210 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.54
DDX39B-202ENST00000396172 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.54
DDX39B-202ENST00000396172 CACNB3P54284 484 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.54
DDX39B-202ENST00000396172 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.54
DDX39B-202ENST00000396172 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 SWAP70Q9UH65 585 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 OTOFQ9HC10 1997 aa11.71□□□□□ -0.54
DDX39B-202ENST00000396172 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
DDX39B-202ENST00000396172 AKNAD1Q5T1N1 836 aa11.7□□□□□ -0.54
DDX39B-202ENST00000396172 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms