RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SEC31BQ9NQW1 1179 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 GPHNQ9NQX3 736 aaPredicted RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 MED23Q9ULK4 1368 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 DCCP43146 1447 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 GOLGA6L9A6NEM1 432 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 CLSTN1O94985 981 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 MCAMP43121 646 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 GYG1P46976 350 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 EIF5P55010 431 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 NLRP12P59046 1061 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 PPARAQ07869 468 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 CCDC148Q8NFR7 591 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 VAT1LQ9HCJ6 419 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 KCNJ14Q9UNX9 436 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 CDHR2Q9BYE9 1310 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 SSBP05455 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
BDNF-203ENST00000395978 PFKFB1P16118 471 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 NAP1L1P55209 391 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 TDRD7Q8NHU6 1098 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 FTOQ9C0B1 505 aaKnown RBP eCLIP7.49□□□□□ -1.21
BDNF-203ENST00000395978 PIH1D3Q9NQM4 214 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 JAG2Q9Y219 1238 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 CLIC4Q9Y696 253 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 RPAP1Q9BWH6 1393 aaPredicted RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 EPS15P42566 896 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 ST5P78524 1137 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 UBE4AQ14139 1066 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 FANCBQ8NB91 859 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 RAB34Q9BZG1 259 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
BDNF-203ENST00000395978 CCNL1Q9UK58 526 aaPredicted RBP7.49□□□□□ -1.21
BDNF-203ENST00000395978 N4BP3O15049 544 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 TUBB4AP04350 444 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 CHGBP05060 677 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 NDUFA8P51970 172 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SLC39A14Q15043 492 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 TRAPPC3LQ5T215 181 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 STOX1Q6ZVD7 989 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 NOSTRINQ8IVI9 506 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 IQUBQ8NA54 791 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 LINC00301Q8NCQ3 95 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 RMND1Q9NWS8 449 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 TFCP2L1Q9NZI6 479 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 CGNQ9P2M7 1197 aaKnown RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 PXDNQ92626 1479 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 USP17L21D6R901 530 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 MPHOSPH10O00566 681 aaKnown RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 POLR2DO15514 142 aaKnown RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 KIF5CO60282 957 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 FANCCQ00597 558 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SPAG1Q07617 926 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 NKX1-1Q15270 411 aaPredicted RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 SUSD4Q5VX71 490 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 RRAGBQ5VZM2 374 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 HEATR3Q7Z4Q2 680 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 MYRIPQ8NFW9 859 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 CTAGE1Q96RT6 745 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 STRBPQ96SI9 672 aaKnown RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 TAF6LQ9Y6J9 622 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 PALLDQ8WX93 1383 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 BTBD18B2RXH4 712 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 PLCG2P16885 1265 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 RBM6P78332 1123 aaKnown RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 RASGRF1Q13972 1273 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 ZNF174Q15697 407 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SPECC1Q5M775 1068 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 CRACR2BQ8N4Y2 399 aaPredicted RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 MLKLQ8NB16 471 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SDR42E1Q8WUS8 393 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 PGBD1Q96JS3 809 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 PLA2G12BQ9BX93 195 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 ACBD3Q9H3P7 528 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 AATFQ9NY61 560 aaKnown RBP eCLIP7.48□□□□□ -1.21
BDNF-203ENST00000395978 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 RIPOR2Q9Y4F9 1068 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
BDNF-203ENST00000395978 ZNF609O15014 1411 aa7.48□□□□□ -1.21
BDNF-203ENST00000395978 SH2B2O14492 632 aaPredicted RBP7.47□□□□□ -1.21
BDNF-203ENST00000395978 CASQ1P31415 396 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 STAT6P42226 847 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 AMPD3Q01432 767 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 EXOSC10Q01780 885 aaKnown RBP7.47□□□□□ -1.21
BDNF-203ENST00000395978 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
BDNF-203ENST00000395978 SCARF1Q14162 830 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 TMEM266Q2M3C6 531 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 HSP90B2PQ58FF3 399 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 WDR66Q8TBY9 1149 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CAGE1Q8TC20 777 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 ZHX3Q9H4I2 956 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 LIFRP42702 1097 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 GNG11P61952 73 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms