RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CETPP11597 493 aa16.83■□□□□ 0.28
CXCL12-205ENST00000395794 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
CXCL12-205ENST00000395794 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-205ENST00000395794 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
CXCL12-205ENST00000395794 ZNF512BQ96KM6 892 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-205ENST00000395794 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-205ENST00000395794 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.28
CXCL12-205ENST00000395794 BAG3O95817 575 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 PPATQ06203 517 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 PPIL2Q13356 520 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 NAA16Q6N069 864 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-205ENST00000395794 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 PTPN18Q99952 460 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
CXCL12-205ENST00000395794 IGSF3O75054 1194 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 INPP5BP32019 993 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 CRHR2Q13324 411 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 AACSQ86V21 672 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 BRI3BPQ8WY22 251 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
CXCL12-205ENST00000395794 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
CXCL12-205ENST00000395794 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
CXCL12-205ENST00000395794 IRF6O14896 467 aa16.8■□□□□ 0.28
CXCL12-205ENST00000395794 PLCG2P16885 1265 aa16.8■□□□□ 0.28
CXCL12-205ENST00000395794 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
CXCL12-205ENST00000395794 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-205ENST00000395794 ERO1AQ96HE7 468 aa16.8■□□□□ 0.28
CXCL12-205ENST00000395794 OTOFQ9HC10 1997 aa16.79■□□□□ 0.28
CXCL12-205ENST00000395794 CYP2E1P05181 493 aaPredicted RBP16.79■□□□□ 0.28
CXCL12-205ENST00000395794 ZAP70P43403 619 aa16.79■□□□□ 0.28
CXCL12-205ENST00000395794 RHBDL3P58872 404 aa16.79■□□□□ 0.28
CXCL12-205ENST00000395794 NOL9Q5SY16 702 aaKnown RBP16.79■□□□□ 0.28
CXCL12-205ENST00000395794 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
CXCL12-205ENST00000395794 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
CXCL12-205ENST00000395794 ZNF384Q8TF68 577 aa16.79■□□□□ 0.28
CXCL12-205ENST00000395794 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-205ENST00000395794 APBB1O00213 710 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 SP3Q02447 781 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-205ENST00000395794 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 KIF1BPQ96EK5 621 aa16.78■□□□□ 0.28
CXCL12-205ENST00000395794 ZCCHC17Q9NP64 241 aaKnown RBP16.78■□□□□ 0.28
CXCL12-205ENST00000395794 DDX4Q9NQI0 724 aaKnown RBP16.78■□□□□ 0.28
CXCL12-205ENST00000395794 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
CXCL12-205ENST00000395794 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 ABCB7O75027 752 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 RAB11FIP3O75154 756 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
CXCL12-205ENST00000395794 KCNA4P22459 653 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 SH3BP5LQ7L8J4 393 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 SCYL3Q8IZE3 742 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.28
CXCL12-205ENST00000395794 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
CXCL12-205ENST00000395794 PHF20L1A8MW92 1017 aa16.76■□□□□ 0.27
CXCL12-205ENST00000395794 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
CXCL12-205ENST00000395794 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-205ENST00000395794 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-205ENST00000395794 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.76■□□□□ 0.27
CXCL12-205ENST00000395794 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
CXCL12-205ENST00000395794 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
CXCL12-205ENST00000395794 BTBD19C9JJ37 291 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 CXCL11O14625 94 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 TBC1D12O60347 775 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
CXCL12-205ENST00000395794 CYP7A1P22680 504 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 PPP4CP60510 307 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 MAP3K10Q02779 954 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 MAP3K12Q12852 859 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 TMED8Q6PL24 325 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-205ENST00000395794 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
CXCL12-205ENST00000395794 KCNH4Q9UQ05 1017 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 ATRNL1Q5VV63 1379 aa16.75■□□□□ 0.27
CXCL12-205ENST00000395794 KIF22Q14807 665 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-205ENST00000395794 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 TRIM34Q9BYJ4 488 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 LAMB1P07942 1786 aa16.74■□□□□ 0.27
CXCL12-205ENST00000395794 TLR2O60603 784 aa16.73■□□□□ 0.27
CXCL12-205ENST00000395794 PTPRAP18433 802 aa16.73■□□□□ 0.27
CXCL12-205ENST00000395794 MLLT1Q03111 559 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-205ENST00000395794 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
CXCL12-205ENST00000395794 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
CXCL12-205ENST00000395794 SIRT2Q8IXJ6 389 aa16.73■□□□□ 0.27
CXCL12-205ENST00000395794 TGFBRAP1Q8WUH2 860 aa16.73■□□□□ 0.27
CXCL12-205ENST00000395794 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms