RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 STYK1Q6J9G0 422 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
CCT4-201ENST00000394440 GPT2Q8TD30 523 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
CCT4-201ENST00000394440 NID2Q14112 1375 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 MINDY4BA8MYZ0 360 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 MKRN1Q9UHC7 482 aaKnown RBP17.56■□□□□ 0.4
CCT4-201ENST00000394440 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 PCP11498 1178 aaKnown RBP17.55■□□□□ 0.4
CCT4-201ENST00000394440 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
CCT4-201ENST00000394440 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 SBK1Q52WX2 424 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 TBC1D22AQ8WUA7 517 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 TMEM67Q5HYA8 995 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
CCT4-201ENST00000394440 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
CCT4-201ENST00000394440 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 USP17L21D6R901 530 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
CCT4-201ENST00000394440 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
CCT4-201ENST00000394440 GDPD2Q9HCC8 539 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
CCT4-201ENST00000394440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCT4-201ENST00000394440 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 IFIT3O14879 490 aaKnown RBP17.54■□□□□ 0.4
CCT4-201ENST00000394440 LDHCP07864 332 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
CCT4-201ENST00000394440 H0YIN7 160 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
CCT4-201ENST00000394440 RRP12Q5JTH9 1297 aaKnown RBP17.53■□□□□ 0.4
CCT4-201ENST00000394440 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCT4-201ENST00000394440 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
CCT4-201ENST00000394440 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 RESTQ13127 1097 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 ESR2Q92731 530 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
CCT4-201ENST00000394440 GAKO14976 1311 aa17.53■□□□□ 0.4
CCT4-201ENST00000394440 KIF13BQ9NQT8 1826 aa17.52■□□□□ 0.4
CCT4-201ENST00000394440 MBD3O95983 291 aa17.52■□□□□ 0.4
CCT4-201ENST00000394440 METAP2P50579 478 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCT4-201ENST00000394440 CERS3Q8IU89 383 aa17.52■□□□□ 0.4
CCT4-201ENST00000394440 SH3RF3Q8TEJ3 882 aaPredicted RBP17.52■□□□□ 0.4
CCT4-201ENST00000394440 ZC3H12CQ9C0D7 883 aaKnown RBP17.52■□□□□ 0.4
CCT4-201ENST00000394440 TOMM22Q9NS69 142 aa17.52■□□□□ 0.4
CCT4-201ENST00000394440 GPR75-ASB3A0A0A6YYF3 556 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 FSD2A1L4K1 749 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 RIMBP2O15034 1052 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 ORC4O43929 436 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 BAG3O95817 575 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 EVX2Q03828 476 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.39
CCT4-201ENST00000394440 SEC23AQ15436 765 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 MYH1P12882 1939 aa17.52■□□□□ 0.39
CCT4-201ENST00000394440 SCN9AQ15858 1988 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 ZBTB43O43298 467 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
CCT4-201ENST00000394440 CDC27P30260 824 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 CHRNA5P30532 468 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 RCAN1P53805 252 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 GTF2IP78347 998 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 NTRK3Q16288 839 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 SUGT1Q9Y2Z0 365 aa17.51■□□□□ 0.39
CCT4-201ENST00000394440 H3BQV1 296 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 GADD45BO75293 160 aaPredicted RBP17.5■□□□□ 0.39
CCT4-201ENST00000394440 WTAPQ15007 396 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
CCT4-201ENST00000394440 CPLX1O14810 134 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 CYP2D6P10635 497 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 RXRAP19793 462 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 ADD1P35611 737 aaKnown RBP17.5■□□□□ 0.39
CCT4-201ENST00000394440 BTDP43251 543 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 NFXL1Q6ZNB6 911 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 EYA3Q99504 573 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
CCT4-201ENST00000394440 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
CCT4-201ENST00000394440 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 TNKSO95271 1327 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 FIBPO43427 364 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
CCT4-201ENST00000394440 C12orf60Q5U649 245 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms