RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 XPO4Q9C0E2 1151 aaKnown RBP19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 GCKP35557 465 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 POSTNQ15063 836 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 PA2G4Q9UQ80 394 aaKnown RBP19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 AKAP4Q5JQC9 854 aa19.08■□□□□ 0.65
COL4A3BP-203ENST00000380494 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.65
COL4A3BP-203ENST00000380494 XAGE3Q8WTP9 111 aa19.08■□□□□ 0.65
COL4A3BP-203ENST00000380494 NFE2L3Q9Y4A8 694 aa19.08■□□□□ 0.65
COL4A3BP-203ENST00000380494 LRCH2Q5VUJ6 765 aa19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 ARHGEF2Q92974 986 aaKnown RBP19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 RAPGEF1Q13905 1077 aa19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 CHST3Q7LGC8 479 aa19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 SSX2IPQ9Y2D8 614 aa19.08■□□□□ 0.64
COL4A3BP-203ENST00000380494 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 KIFAP3Q92845 792 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 ZBTB9Q96C00 473 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 BAIAP2L1Q9UHR4 511 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 ERCC5P28715 1186 aaPredicted RBP19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 ETF1P62495 437 aaKnown RBP19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 SNCBQ16143 134 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 RPUSD2Q8IZ73 545 aaKnown RBP19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 EFCC1Q9HA90 598 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 GJC1P36383 396 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 RAB17Q9H0T7 212 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 PPP2R2CQ9Y2T4 447 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 ZNF131P52739 623 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 PDE4DQ08499 809 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 AP1ARQ63HQ0 302 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 CSGALNACT2Q8N6G5 542 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 KRT9P35527 623 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 TRIM58Q8NG06 486 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 SMARCC2Q8TAQ2 1214 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 GBP5Q96PP8 586 aa19.07■□□□□ 0.64
COL4A3BP-203ENST00000380494 GPTP24298 496 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 RNF168Q8IYW5 571 aaPredicted RBP19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 RABGGTAQ92696 567 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 RNF40O75150 1001 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 CPA1P15085 419 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 TESK2Q96S53 571 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 CFAP43Q8NDM7 1665 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 TNFAIP3P21580 790 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 TFCP2Q12800 502 aa19.06■□□□□ 0.64
COL4A3BP-203ENST00000380494 IRX4P78413 519 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 INF2Q27J81 1249 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 RPGRQ92834 1020 aaKnown RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 BABAM1Q9NWV8 329 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 POLR2DO15514 142 aaKnown RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 ADALQ6DHV7 355 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 GPT2Q8TD30 523 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 RRP15Q9Y3B9 282 aaKnown RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 ACEP12821 1306 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 CALUO43852 315 aaPredicted RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 BRD2P25440 801 aaKnown RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 TRPC3Q13507 836 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 DENND2CQ68D51 928 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 FRMD4BQ9Y2L6 1034 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 PPIP5K1Q6PFW1 1433 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 TRAF5O00463 557 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 MAGEA1P43355 309 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 MAP7Q14244 749 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 RPAINQ86UA6 219 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 SPOPO43791 374 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 HHATQ5VTY9 493 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 STK24Q9Y6E0 443 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 FAM169AQ9Y6X4 670 aa19.05■□□□□ 0.64
COL4A3BP-203ENST00000380494 PER1O15534 1290 aaPredicted RBP19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 COPS6Q7L5N1 327 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 RPS6KA1Q15418 735 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 ZNF174Q15697 407 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 ZNF622Q969S3 477 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■□□□ 14
COL4A3BP-203ENST00000380494 BCAP29Q9UHQ4 241 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 PPP2R5BQ15173 497 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 ZNF365Q70YC5 407 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 SLF1Q9BQI6 1058 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 RIPOR2Q9Y4F9 1068 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 ANXA1P04083 346 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 PPP2R5EQ16537 467 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 TSC1Q92574 1164 aa19.04■□□□□ 0.64
COL4A3BP-203ENST00000380494 PHLDB3Q6NSJ2 640 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 MAIP1Q8WWC4 291 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 RABGAP1Q9Y3P9 1069 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 RGS12O14924 1447 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 CCDC84Q86UT8 332 aaPredicted RBP19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 VPS52Q8N1B4 723 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 MUM1Q2TAK8 710 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 RABEP2Q9H5N1 569 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 KIAA1468Q9P260 1216 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 HYOU1Q9Y4L1 999 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 PHLPP2Q6ZVD8 1323 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 HIP1RO75146 1068 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 GMNNO75496 209 aa19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 DCAF17Q5H9S7 520 aaPredicted RBP19.03■□□□□ 0.64
COL4A3BP-203ENST00000380494 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms