RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 GSTA2P09210 222 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 TPTE2Q6XPS3 522 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 SLC9A5Q14940 896 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 NELFCDQ8IXH7 590 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 SUFUQ9UMX1 484 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 BCS1LQ9Y276 419 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 CFBP00751 764 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 ASIC3Q9UHC3 531 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHD3-203ENST00000380358 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 BRD3Q15059 726 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 TTC31Q49AM3 519 aaPredicted RBP13.87□□□□□ -0.19
CHD3-203ENST00000380358 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 IFNKQ9P0W0 207 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 MOSPD1Q9UJG1 213 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
CHD3-203ENST00000380358 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
CHD3-203ENST00000380358 ATP11AP98196 1134 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 KLHL7Q8IXQ5 586 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 CAPN9O14815 690 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 MYCT1Q8N699 235 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 PPFIBP2Q8ND30 876 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 GLG1Q92896 1179 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
CHD3-203ENST00000380358 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 GCNT3O95395 438 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 UBE2HP62256 183 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.197e-9■■■■■ 40.5
CHD3-203ENST00000380358 CETN3O15182 167 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
CHD3-203ENST00000380358 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
CHD3-203ENST00000380358 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
CHD3-203ENST00000380358 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 GPR161Q8N6U8 529 aaKnown RBP13.85□□□□□ -0.19
CHD3-203ENST00000380358 TNNI1P19237 187 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 PDE4DQ08499 809 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
CHD3-203ENST00000380358 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 MCUQ8NE86 351 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 CDC26Q8NHZ8 85 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 MCUR1Q96AQ8 359 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 AATFQ9NY61 560 aaKnown RBP eCLIP13.85□□□□□ -0.196e-17■■■□□ 16
CHD3-203ENST00000380358 GNAQP50148 359 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 CTAGE3PQ8IX95 158 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 SEPT8Q92599 483 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 PPP1R16BQ96T49 567 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD3-203ENST00000380358 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 TOM1O60784 492 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 KRT83P78385 493 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
CHD3-203ENST00000380358 NUCKS1Q9H1E3 243 aaKnown RBP13.85□□□□□ -0.19
CHD3-203ENST00000380358 ANKRD35Q8N283 1001 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 FIS1Q9Y3D6 152 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 WDR48Q8TAF3 677 aa13.85□□□□□ -0.19
CHD3-203ENST00000380358 ATP6V1E1P36543 226 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 AFAP1L2Q8N4X5 818 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 MRPS27Q92552 414 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 VPS41P49754 854 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 VCX3BQ9H321 246 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 PRDM1O75626 825 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 GBP6Q6ZN66 633 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 ANKRD42Q8N9B4 389 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 PDZD8Q8NEN9 1154 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 TACO1Q9BSH4 297 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 TBC1D2Q9BYX2 928 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 WIZO95785 1651 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 POGZQ7Z3K3 1410 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 KRT81Q14533 505 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 LIN9Q5TKA1 542 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms