RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 CUTAO60888 179 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 KIAA0754O94854 1291 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 MACROD2A1Z1Q3 448 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 NONOQ15233 471 aaKnown RBP eCLIP22.23■■□□□ 1.15
PCDH8-202ENST00000377942 FMNL3Q8IVF7 1028 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 NCOA5Q9HCD5 579 aaKnown RBP22.23■■□□□ 1.15
PCDH8-202ENST00000377942 STAP2Q9UGK3 403 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 C2CD5Q86YS7 1000 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 USP40Q9NVE5 1235 aa22.23■■□□□ 1.15
PCDH8-202ENST00000377942 PROSER3Q2NL68 480 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 FERMT1Q9BQL6 677 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 LEMD3Q9Y2U8 911 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 PAXBP1Q9Y5B6 917 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 PIK3AP1Q6ZUJ8 805 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 UNC5CLQ8IV45 518 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 ADCY7P51828 1080 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 RNF17Q9BXT8 1623 aaKnown RBP22.22■■□□□ 1.15
PCDH8-202ENST00000377942 SKILP12757 684 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 PRPHP41219 470 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 UBE3CQ15386 1083 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
PCDH8-202ENST00000377942 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 TTC38Q5R3I4 469 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 CCDC186Q7Z3E2 898 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 ZNF274Q96GC6 653 aaPredicted RBP22.21■■□□□ 1.15
PCDH8-202ENST00000377942 GREM2Q9H772 168 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 GOLGA6L7A0A1B0GV03 622 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 H7C1D1 291 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 ZBED4O75132 1171 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 GYG1P46976 350 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 DRC1Q96MC2 740 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
PCDH8-202ENST00000377942 PCP11498 1178 aaKnown RBP22.21■■□□□ 1.15
PCDH8-202ENST00000377942 CDC42BPGQ6DT37 1551 aa22.2■■□□□ 1.15
PCDH8-202ENST00000377942 KRT83P78385 493 aa22.2■■□□□ 1.15
PCDH8-202ENST00000377942 FCHSD1Q86WN1 690 aa22.2■■□□□ 1.15
PCDH8-202ENST00000377942 IFNL3Q8IZI9 196 aa22.2■■□□□ 1.15
PCDH8-202ENST00000377942 USP17L12C9JPN9 530 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 USP17L21D6R901 530 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 CCT6AP40227 531 aaKnown RBP22.2■■□□□ 1.14
PCDH8-202ENST00000377942 VTI1AQ96AJ9 217 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 KRT40Q6A162 431 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 A0A1B0GVL5 298 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 JADE2Q9NQC1 790 aa22.2■■□□□ 1.14
PCDH8-202ENST00000377942 CKAP4Q07065 602 aaKnown RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 TAF3Q5VWG9 929 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 TTC12Q9H892 705 aaPredicted RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 KCNH3Q9ULD8 1083 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 ZNF804BA4D1E1 1349 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 XDHP47989 1333 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 BCAMP50895 628 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 MYL5Q02045 173 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 APBB1IPQ7Z5R6 666 aaPredicted RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 PRPF4BQ13523 1007 aaKnown RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 NEK11Q8NG66 645 aa22.19■■□□□ 1.14
PCDH8-202ENST00000377942 EDC3Q96F86 508 aaKnown RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 GSPT1P15170 499 aaKnown RBP22.19■■□□□ 1.14
PCDH8-202ENST00000377942 HSP90AA4PQ58FG1 418 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 CEP135Q66GS9 1140 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 CGNQ9P2M7 1197 aaKnown RBP22.18■■□□□ 1.14
PCDH8-202ENST00000377942 IFFO1Q0D2I5 559 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 MCTP2Q6DN12 878 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 RXRBP28702 533 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 TCP10Q12799 353 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 KRT27Q7Z3Y8 459 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 OSBPL3Q9H4L5 887 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 SYNCQ9H7C4 482 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 A0A0D9SFI3 127 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 LMBR1Q8WVP7 490 aa22.18■■□□□ 1.14
PCDH8-202ENST00000377942 HSPD1P10809 573 aaKnown RBP22.17■■□□□ 1.14
PCDH8-202ENST00000377942 ARID4AP29374 1257 aaPredicted RBP22.17■■□□□ 1.14
PCDH8-202ENST00000377942 GRM1Q13255 1194 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 CNNM4Q6P4Q7 775 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 ZNF654Q8IZM8 581 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 CHURC1Q8WUH1 139 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 GOLGA6L10A0A0M3HER8 536 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 CCNT1O60563 726 aaKnown RBP22.17■■□□□ 1.14
PCDH8-202ENST00000377942 TACC1O75410 805 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 ACTN2P35609 894 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 STX17P56962 302 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 ATP10DQ9P241 1426 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 BBOX1O75936 387 aa22.17■■□□□ 1.14
PCDH8-202ENST00000377942 ALKQ9UM73 1620 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
PCDH8-202ENST00000377942 CCDC175P0C221 793 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 MYZAPP0CAP1 466 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 UBXN1Q04323 297 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 HLTFQ14527 1009 aaKnown RBP eCLIP22.16■■□□□ 1.14
PCDH8-202ENST00000377942 ZBTB21Q9ULJ3 1066 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 KIF4AO95239 1232 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 BRDTQ58F21 947 aaPredicted RBP22.16■■□□□ 1.14
PCDH8-202ENST00000377942 PRIMPOLQ96LW4 560 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 CCDC42Q96M95 316 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 ADGRB3O60242 1522 aa22.16■■□□□ 1.14
PCDH8-202ENST00000377942 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms