RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ANKRD23Q86SG2 305 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 ITPRIPQ8IWB1 547 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 DDX4Q9NQI0 724 aaKnown RBP25.9■■□□□ 1.74
VSX1-201ENST00000376707 PICK1Q9NRD5 415 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 RAI14Q9P0K7 980 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 ATP8B2P98198 1209 aa25.89■■□□□ 1.74
VSX1-201ENST00000376707 SSH3Q8TE77 659 aa25.89■■□□□ 1.74
VSX1-201ENST00000376707 ZNF384Q8TF68 577 aa25.89■■□□□ 1.74
VSX1-201ENST00000376707 C1orf115Q9H7X2 142 aa25.89■■□□□ 1.74
VSX1-201ENST00000376707 TNRC18O15417 2968 aaPredicted RBP25.89■■□□□ 1.73
VSX1-201ENST00000376707 DDTLA6NHG4 134 aaPredicted RBP25.88■■□□□ 1.73
VSX1-201ENST00000376707 PHF20L1A8MW92 1017 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 PDHXO00330 501 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 MCAMP43121 646 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 SCYL3Q8IZE3 742 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 ARMC5Q96C12 935 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 NSUN4Q96CB9 384 aaKnown RBP25.88■■□□□ 1.73
VSX1-201ENST00000376707 GPR108Q9NPR9 543 aa25.88■■□□□ 1.73
VSX1-201ENST00000376707 CXCL11O14625 94 aa25.87■■□□□ 1.73
VSX1-201ENST00000376707 SURF6O75683 361 aaKnown RBP25.87■■□□□ 1.73
VSX1-201ENST00000376707 RHBDL3P58872 404 aa25.87■■□□□ 1.73
VSX1-201ENST00000376707 LACTBP83111 547 aaPredicted RBP25.87■■□□□ 1.73
VSX1-201ENST00000376707 TNNI3KQ59H18 835 aa25.87■■□□□ 1.73
VSX1-201ENST00000376707 LRP2BPQ9P2M1 347 aa25.87■■□□□ 1.73
VSX1-201ENST00000376707 FPGT-TNNI3KV9GXZ4 949 aa25.87■■□□□ 1.73
VSX1-201ENST00000376707 DOCK2Q92608 1830 aa25.86■■□□□ 1.73
VSX1-201ENST00000376707 TTC39AQ5SRH9 613 aa25.86■■□□□ 1.73
VSX1-201ENST00000376707 PTCH2Q9Y6C5 1203 aa25.86■■□□□ 1.73
VSX1-201ENST00000376707 ZHX2Q9Y6X8 837 aa25.86■■□□□ 1.73
VSX1-201ENST00000376707 POTEFA5A3E0 1075 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 MAP4K4O95819 1239 aaPredicted RBP25.85■■□□□ 1.73
VSX1-201ENST00000376707 MAP3K10Q02779 954 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 MOGSQ13724 837 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 SLC9C1Q4G0N8 1177 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 CCDC158Q5M9N0 1113 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 ARHGAP39Q9C0H5 1083 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 CPA4Q9UI42 421 aa25.85■■□□□ 1.73
VSX1-201ENST00000376707 HTTP42858 3142 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
VSX1-201ENST00000376707 RLBP1P12271 317 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 PTPRAP18433 802 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 C17orf99Q6UX52 265 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 NBPF11Q86T75 865 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 DBNDD2Q9BQY9 259 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 SNRKQ9NRH2 765 aa25.84■■□□□ 1.73
VSX1-201ENST00000376707 ZBTB7BO15156 539 aaPredicted RBP25.83■■□□□ 1.73
VSX1-201ENST00000376707 CTNND1O60716 968 aaKnown RBP25.83■■□□□ 1.73
VSX1-201ENST00000376707 GNRH1P01148 92 aa25.83■■□□□ 1.73
VSX1-201ENST00000376707 SLURP2P0DP57 97 aa25.83■■□□□ 1.73
VSX1-201ENST00000376707 NOL10Q9BSC4 688 aaKnown RBP25.83■■□□□ 1.73
VSX1-201ENST00000376707 ECM2O94769 699 aaPredicted RBP25.82■■□□□ 1.72
VSX1-201ENST00000376707 PRPF38BQ5VTL8 546 aaKnown RBP25.82■■□□□ 1.72
VSX1-201ENST00000376707 FASTKD5Q7L8L6 764 aaKnown RBP25.82■■□□□ 1.72
VSX1-201ENST00000376707 ZNF333Q96JL9 665 aa25.82■■□□□ 1.72
VSX1-201ENST00000376707 PARK7Q99497 189 aaKnown RBP25.82■■□□□ 1.72
VSX1-201ENST00000376707 TMEM106CQ9BVX2 250 aa25.82■■□□□ 1.72
VSX1-201ENST00000376707 PDE4DIPQ5VU43 2346 aa25.82■■□□□ 1.72
VSX1-201ENST00000376707 GPAT2Q6NUI2 795 aa25.81■■□□□ 1.72
VSX1-201ENST00000376707 TEX11Q8IYF3 940 aa25.81■■□□□ 1.72
VSX1-201ENST00000376707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.81■■□□□ 1.72
VSX1-201ENST00000376707 NOP58Q9Y2X3 529 aaKnown RBP25.81■■□□□ 1.72
VSX1-201ENST00000376707 AFG3L2Q9Y4W6 797 aa25.81■■□□□ 1.72
VSX1-201ENST00000376707 A0A0G2JLL6 359 aaPredicted RBP25.8■■□□□ 1.72
VSX1-201ENST00000376707 TBC1D12O60347 775 aa25.8■■□□□ 1.72
VSX1-201ENST00000376707 PRMT2P55345 433 aa25.8■■□□□ 1.72
VSX1-201ENST00000376707 NAA16Q6N069 864 aaPredicted RBP25.8■■□□□ 1.72
VSX1-201ENST00000376707 GADL1Q6ZQY3 521 aa25.8■■□□□ 1.72
VSX1-201ENST00000376707 PRRT2Q7Z6L0 340 aaPredicted RBP25.8■■□□□ 1.72
VSX1-201ENST00000376707 OSBPL5Q9H0X9 879 aaPredicted RBP25.8■■□□□ 1.72
VSX1-201ENST00000376707 ADGRA2Q96PE1 1338 aa25.8■■□□□ 1.72
VSX1-201ENST00000376707 BAG3O95817 575 aa25.79■■□□□ 1.72
VSX1-201ENST00000376707 PSMC4P43686 418 aa25.79■■□□□ 1.72
VSX1-201ENST00000376707 COL2A1P02458 1487 aaPredicted RBP25.79■■□□□ 1.72
VSX1-201ENST00000376707 FAM196BA6NMK8 535 aa25.78■■□□□ 1.72
VSX1-201ENST00000376707 CYP2C8P10632 490 aa25.78■■□□□ 1.72
VSX1-201ENST00000376707 SH3RF3Q8TEJ3 882 aaPredicted RBP25.78■■□□□ 1.72
VSX1-201ENST00000376707 ZNF512BQ96KM6 892 aaPredicted RBP25.78■■□□□ 1.72
VSX1-201ENST00000376707 TRIM75PA6NK02 468 aa25.77■■□□□ 1.72
VSX1-201ENST00000376707 FMNL1O95466 1100 aaPredicted RBP25.77■■□□□ 1.72
VSX1-201ENST00000376707 CYP2E1P05181 493 aaPredicted RBP25.77■■□□□ 1.72
VSX1-201ENST00000376707 HOXD10P28358 340 aa25.77■■□□□ 1.72
VSX1-201ENST00000376707 SH3TC2Q8TF17 1288 aa25.77■■□□□ 1.72
VSX1-201ENST00000376707 TRIM47Q96LD4 638 aa25.77■■□□□ 1.72
VSX1-201ENST00000376707 AATFQ9NY61 560 aaKnown RBP eCLIP25.77■■□□□ 1.72
VSX1-201ENST00000376707 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
VSX1-201ENST00000376707 PLCG2P16885 1265 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 EN2P19622 333 aaPredicted RBP25.76■■□□□ 1.71
VSX1-201ENST00000376707 ZAP70P43403 619 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 SLC4A8Q2Y0W8 1093 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 CEP85Q6P2H3 762 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 PANK1Q8TE04 598 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 CCDC8Q9H0W5 538 aaPredicted RBP25.76■■□□□ 1.71
VSX1-201ENST00000376707 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.76■■□□□ 1.71
VSX1-201ENST00000376707 SRRDQ9UH36 339 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 ZSWIM8A7E2V4 1837 aa25.76■■□□□ 1.71
VSX1-201ENST00000376707 DOCK1Q14185 1865 aa25.75■■□□□ 1.71
VSX1-201ENST00000376707 MYCP01106 439 aaPredicted RBP25.75■■□□□ 1.71
VSX1-201ENST00000376707 CTGFP29279 349 aa25.75■■□□□ 1.71
VSX1-201ENST00000376707 CCDC84Q86UT8 332 aaPredicted RBP25.75■■□□□ 1.71
VSX1-201ENST00000376707 TLR7Q9NYK1 1049 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms