RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 EIF6P56537 245 aaKnown RBP20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 MYL5Q02045 173 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CHRNDQ07001 517 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 PDE4BQ07343 736 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TMEM87BQ96K49 555 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ELP1O95163 1332 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 NEMFO60524 1076 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 UBA7P41226 1012 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 PIK3AP1Q6ZUJ8 805 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ADD2P35612 726 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 NAA30Q147X3 362 aaPredicted RBP20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 PKNOX2Q96KN3 472 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 SERTAD1Q9UHV2 236 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 PATL2C9JE40 543 aaKnown RBP20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KRT18P05783 430 aaKnown RBP20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RCOR1Q9UKL0 485 aa20.22■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 LOC102724428A0A0B4J2F2 783 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 SIK1P57059 783 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CCDC12Q8WUD4 166 aaPredicted RBP20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 BLZF1Q9H2G9 400 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ZNF654Q8IZM8 581 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 LINC00301Q8NCQ3 95 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KIAA1524Q8TCG1 905 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 NFE2L3Q9Y4A8 694 aa20.21■□□□□ 0.83
TRAF3IP1-201ENST00000373327 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 UBE2Q2LH0YL09 131 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ATP1A3P13637 1013 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CIAO1O76071 339 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CASQ1P31415 396 aa20.2■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CCP110O43303 1012 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 LONRF3Q496Y0 759 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GOLGA6L1Q8N7Z2 621 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CCDC150Q8NCX0 1101 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 FANCLQ9NW38 375 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ADKP55263 362 aaKnown RBP20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CCDC144BQ3MJ40 725 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TNKSO95271 1327 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 PPARAQ07869 468 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 STIM1Q13586 685 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TMTC2Q8N394 836 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 UBE2Q2Q8WVN8 375 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 AK7Q96M32 723 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 PAXBP1Q9Y5B6 917 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ZSCAN12O43309 604 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CDC25AP30304 524 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KIF23Q02241 960 aaPredicted RBP20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CCDC96Q2M329 555 aa20.19■□□□□ 0.82
TRAF3IP1-201ENST00000373327 FAM193AP78312 1265 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ELF2Q15723 593 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GPR108Q9NPR9 543 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KRT2P35908 639 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 DEF6Q9H4E7 631 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 SEC63Q9UGP8 760 aaKnown RBP20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 YEATS4O95619 227 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 LRRC8AQ8IWT6 810 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 VPS16Q9H269 839 aa20.18■□□□□ 0.82
TRAF3IP1-201ENST00000373327 SMYD4Q8IYR2 804 aaPredicted RBP20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 AP5Z1O43299 807 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CASP1P29466 404 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 NLRP12P59046 1061 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CCDC178Q5BJE1 867 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 MEGF6O75095 1541 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CDC27P30260 824 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 EPS15P42566 896 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 DESI2Q9BSY9 194 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 MROH5Q6ZUA9 1318 aa20.17■□□□□ 0.82
TRAF3IP1-201ENST00000373327 DEXIO95424 95 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 CTDNEP1O95476 244 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TNNT3P45378 269 aaPredicted RBP20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TMCO3Q6UWJ1 677 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 NEDD4P46934 1319 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KIF28PB7ZC32 967 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GNAT2P19087 354 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 STAT6P42226 847 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 RTEL1Q9NZ71 1219 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ZMYM6O95789 1325 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ATL3Q6DD88 541 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TPTE2Q6XPS3 522 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KIAA1328Q86T90 577 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 NOSTRINQ8IVI9 506 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 FANCBQ8NB91 859 aa20.16■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KCNQ2O43526 872 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms