RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 PKN2Q16513 984 aaKnown RBP18.41■□□□□ 0.54
C9orf16-201ENST00000372994 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
C9orf16-201ENST00000372994 SH3BP5LQ7L8J4 393 aa18.41■□□□□ 0.54
C9orf16-201ENST00000372994 BRI3BPQ8WY22 251 aa18.41■□□□□ 0.54
C9orf16-201ENST00000372994 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
C9orf16-201ENST00000372994 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
C9orf16-201ENST00000372994 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
C9orf16-201ENST00000372994 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
C9orf16-201ENST00000372994 ATRNL1Q5VV63 1379 aa18.41■□□□□ 0.54
C9orf16-201ENST00000372994 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
C9orf16-201ENST00000372994 CYP2E1P05181 493 aaPredicted RBP18.4■□□□□ 0.54
C9orf16-201ENST00000372994 PPATQ06203 517 aa18.4■□□□□ 0.54
C9orf16-201ENST00000372994 CCL15Q16663 113 aa18.4■□□□□ 0.54
C9orf16-201ENST00000372994 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
C9orf16-201ENST00000372994 TLR7Q9NYK1 1049 aaKnown RBP18.4■□□□□ 0.54
C9orf16-201ENST00000372994 DDTLA6NHG4 134 aaPredicted RBP18.39■□□□□ 0.53
C9orf16-201ENST00000372994 PHF20L1A8MW92 1017 aa18.39■□□□□ 0.53
C9orf16-201ENST00000372994 IRF6O14896 467 aa18.39■□□□□ 0.53
C9orf16-201ENST00000372994 CRHR2Q13324 411 aa18.39■□□□□ 0.53
C9orf16-201ENST00000372994 PPIL2Q13356 520 aa18.39■□□□□ 0.53
C9orf16-201ENST00000372994 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
C9orf16-201ENST00000372994 CETPP11597 493 aa18.38■□□□□ 0.53
C9orf16-201ENST00000372994 ZAP70P43403 619 aa18.38■□□□□ 0.53
C9orf16-201ENST00000372994 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
C9orf16-201ENST00000372994 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
C9orf16-201ENST00000372994 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
C9orf16-201ENST00000372994 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
C9orf16-201ENST00000372994 HMMRO75330 724 aa18.37■□□□□ 0.53
C9orf16-201ENST00000372994 PICALMQ13492 652 aa18.37■□□□□ 0.53
C9orf16-201ENST00000372994 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
C9orf16-201ENST00000372994 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
C9orf16-201ENST00000372994 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
C9orf16-201ENST00000372994 ZCCHC17Q9NP64 241 aaKnown RBP18.37■□□□□ 0.53
C9orf16-201ENST00000372994 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
C9orf16-201ENST00000372994 HTTP42858 3142 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 RGS19P49795 217 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 PPP4CP60510 307 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 AACSQ86V21 672 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 KCNH4Q9UQ05 1017 aa18.36■□□□□ 0.53
C9orf16-201ENST00000372994 TBC1D12O60347 775 aa18.35■□□□□ 0.53
C9orf16-201ENST00000372994 BAG3O95817 575 aa18.35■□□□□ 0.53
C9orf16-201ENST00000372994 KIF1BPQ96EK5 621 aa18.35■□□□□ 0.53
C9orf16-201ENST00000372994 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
C9orf16-201ENST00000372994 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
C9orf16-201ENST00000372994 PIH1D3Q9NQM4 214 aaKnown RBP18.35■□□□□ 0.53
C9orf16-201ENST00000372994 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
C9orf16-201ENST00000372994 BTBD19C9JJ37 291 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 PLCG2P16885 1265 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 TAF1CQ15572 869 aaPredicted RBP18.34■□□□□ 0.53
C9orf16-201ENST00000372994 ADGRA1Q86SQ6 560 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 SCYL3Q8IZE3 742 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
C9orf16-201ENST00000372994 SH3RF3Q8TEJ3 882 aaPredicted RBP18.34■□□□□ 0.53
C9orf16-201ENST00000372994 OSBPL5Q9H0X9 879 aaPredicted RBP18.34■□□□□ 0.53
C9orf16-201ENST00000372994 ZFYVE28Q9HCC9 887 aa18.34■□□□□ 0.53
C9orf16-201ENST00000372994 MAST2Q6P0Q8 1798 aa18.33■□□□□ 0.53
C9orf16-201ENST00000372994 CXCL11O14625 94 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 CTNND1O60716 968 aaKnown RBP18.33■□□□□ 0.52
C9orf16-201ENST00000372994 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 SP3Q02447 781 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 FBXO46Q6PJ61 603 aaPredicted RBP18.33■□□□□ 0.52
C9orf16-201ENST00000372994 TMED8Q6PL24 325 aaPredicted RBP18.33■□□□□ 0.52
C9orf16-201ENST00000372994 ERO1AQ96HE7 468 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 AATFQ9NY61 560 aaKnown RBP eCLIP18.33■□□□□ 0.52
C9orf16-201ENST00000372994 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 CENPFP49454 3210 aa18.33■□□□□ 0.52
C9orf16-201ENST00000372994 PTPRAP18433 802 aa18.32■□□□□ 0.52
C9orf16-201ENST00000372994 MOGSQ13724 837 aa18.32■□□□□ 0.52
C9orf16-201ENST00000372994 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
C9orf16-201ENST00000372994 APBB1O00213 710 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 TLR2O60603 784 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
C9orf16-201ENST00000372994 ANKRD23Q86SG2 305 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 DHX36Q9H2U1 1008 aaKnown RBP18.31■□□□□ 0.52
C9orf16-201ENST00000372994 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 PICK1Q9NRD5 415 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 AFG3L2Q9Y4W6 797 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 ZHX2Q9Y6X8 837 aa18.31■□□□□ 0.52
C9orf16-201ENST00000372994 CYP7A1P22680 504 aa18.3■□□□□ 0.52
C9orf16-201ENST00000372994 CD99L2Q8TCZ2 262 aa18.3■□□□□ 0.52
C9orf16-201ENST00000372994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
C9orf16-201ENST00000372994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
C9orf16-201ENST00000372994 PI4KBQ9UBF8 816 aa18.3■□□□□ 0.52
C9orf16-201ENST00000372994 CDK5RAP2Q96SN8 1893 aa18.3■□□□□ 0.52
C9orf16-201ENST00000372994 FOCADQ5VW36 1801 aa18.29■□□□□ 0.52
C9orf16-201ENST00000372994 IFIT2P09913 472 aaKnown RBP18.29■□□□□ 0.52
C9orf16-201ENST00000372994 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
C9orf16-201ENST00000372994 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
C9orf16-201ENST00000372994 TGFBRAP1Q8WUH2 860 aa18.29■□□□□ 0.52
C9orf16-201ENST00000372994 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
C9orf16-201ENST00000372994 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
C9orf16-201ENST00000372994 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
C9orf16-201ENST00000372994 PDHXO00330 501 aa18.28■□□□□ 0.52
C9orf16-201ENST00000372994 CAP1Q01518 475 aa18.28■□□□□ 0.52
C9orf16-201ENST00000372994 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms