RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 IGSF3O75054 1194 aa27.7■■■□□ 2.02
COL9A2-201ENST00000372736 MAP4K4O95819 1239 aaPredicted RBP27.7■■■□□ 2.02
COL9A2-201ENST00000372736 PICALMQ13492 652 aa27.7■■■□□ 2.02
COL9A2-201ENST00000372736 ADGRA1Q86SQ6 560 aa27.7■■■□□ 2.02
COL9A2-201ENST00000372736 ZNF112Q9UJU3 913 aa27.7■■■□□ 2.02
COL9A2-201ENST00000372736 SPDYE5A6NIY4 337 aa27.69■■■□□ 2.02
COL9A2-201ENST00000372736 NPM3O75607 178 aaKnown RBP27.69■■■□□ 2.02
COL9A2-201ENST00000372736 INHBEP58166 350 aa27.69■■■□□ 2.02
COL9A2-201ENST00000372736 IFNL1Q8IU54 200 aa27.69■■■□□ 2.02
COL9A2-201ENST00000372736 COL2A1P02458 1487 aaPredicted RBP27.69■■■□□ 2.02
COL9A2-201ENST00000372736 DDTLA6NHG4 134 aaPredicted RBP27.68■■■□□ 2.02
COL9A2-201ENST00000372736 IGF2BP3O00425 579 aaKnown RBP eCLIP27.68■■■□□ 2.02
COL9A2-201ENST00000372736 TBC1D8O95759 1140 aa27.68■■■□□ 2.02
COL9A2-201ENST00000372736 INPP5BP32019 993 aa27.68■■■□□ 2.02
COL9A2-201ENST00000372736 OTUD5Q96G74 571 aa27.68■■■□□ 2.02
COL9A2-201ENST00000372736 MS4A4AQ96JQ5 239 aa27.68■■■□□ 2.02
COL9A2-201ENST00000372736 CFHR5Q9BXR6 569 aa27.68■■■□□ 2.02
COL9A2-201ENST00000372736 TESPA1A2RU30 521 aaPredicted RBP27.67■■■□□ 2.02
COL9A2-201ENST00000372736 IFIT2P09913 472 aaKnown RBP27.67■■■□□ 2.02
COL9A2-201ENST00000372736 ANTXR1Q9H6X2 564 aa27.67■■■□□ 2.02
COL9A2-201ENST00000372736 AATFQ9NY61 560 aaKnown RBP eCLIP27.67■■■□□ 2.02
COL9A2-201ENST00000372736 ERO1BQ86YB8 467 aa27.66■■■□□ 2.02
COL9A2-201ENST00000372736 ZSCAN29Q8IWY8 852 aaPredicted RBP27.66■■■□□ 2.02
COL9A2-201ENST00000372736 SH3RF3Q8TEJ3 882 aaPredicted RBP27.66■■■□□ 2.02
COL9A2-201ENST00000372736 IDH1O75874 414 aaKnown RBP27.65■■■□□ 2.02
COL9A2-201ENST00000372736 ALDH1A1P00352 501 aa27.65■■■□□ 2.02
COL9A2-201ENST00000372736 PPP4CP60510 307 aa27.65■■■□□ 2.02
COL9A2-201ENST00000372736 TEX11Q8IYF3 940 aa27.65■■■□□ 2.02
COL9A2-201ENST00000372736 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.65■■■□□ 2.02
COL9A2-201ENST00000372736 PTPN18Q99952 460 aa27.65■■■□□ 2.02
COL9A2-201ENST00000372736 NOL10Q9BSC4 688 aaKnown RBP27.65■■■□□ 2.02
COL9A2-201ENST00000372736 MAP3K10Q02779 954 aa27.64■■■□□ 2.02
COL9A2-201ENST00000372736 NOL9Q5SY16 702 aaKnown RBP27.64■■■□□ 2.02
COL9A2-201ENST00000372736 LRRCC1Q9C099 1032 aa27.64■■■□□ 2.02
COL9A2-201ENST00000372736 OSBPL5Q9H0X9 879 aaPredicted RBP27.64■■■□□ 2.02
COL9A2-201ENST00000372736 BCL11AQ9H165 835 aa27.64■■■□□ 2.02
COL9A2-201ENST00000372736 R3HDMLQ9H3Y0 253 aa27.64■■■□□ 2.02
COL9A2-201ENST00000372736 SIPA1L1O43166 1804 aa27.64■■■□□ 2.01
COL9A2-201ENST00000372736 DOCK1Q14185 1865 aa27.64■■■□□ 2.01
COL9A2-201ENST00000372736 PHF20L1A8MW92 1017 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 BAG3O95817 575 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 SLURP2P0DP57 97 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 PLCG2P16885 1265 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 GTF2A2P52657 109 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 NOM1Q5C9Z4 860 aaKnown RBP27.63■■■□□ 2.01
COL9A2-201ENST00000372736 BRI3BPQ8WY22 251 aa27.63■■■□□ 2.01
COL9A2-201ENST00000372736 CYP7A1P22680 504 aa27.62■■■□□ 2.01
COL9A2-201ENST00000372736 PPIL2Q13356 520 aa27.62■■■□□ 2.01
COL9A2-201ENST00000372736 PCDHB15Q9Y5E8 787 aa27.62■■■□□ 2.01
COL9A2-201ENST00000372736 CCL15-CCL14A0A0B4J2E2 113 aa27.61■■■□□ 2.01
COL9A2-201ENST00000372736 IRF6O14896 467 aa27.61■■■□□ 2.01
COL9A2-201ENST00000372736 CCL15Q16663 113 aa27.61■■■□□ 2.01
COL9A2-201ENST00000372736 MAGEB6Q8N7X4 407 aa27.61■■■□□ 2.01
COL9A2-201ENST00000372736 ZNF296Q8WUU4 475 aaPredicted RBP27.61■■■□□ 2.01
COL9A2-201ENST00000372736 DCTPP1Q9H773 170 aa27.61■■■□□ 2.01
COL9A2-201ENST00000372736 GPR25O00155 361 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 SMARCA5O60264 1052 aaPredicted RBP27.6■■■□□ 2.01
COL9A2-201ENST00000372736 CAPN15O75808 1086 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 PPATQ06203 517 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 MAP3K12Q12852 859 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 CRBNQ96SW2 442 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 MCOLN1Q9GZU1 580 aa27.6■■■□□ 2.01
COL9A2-201ENST00000372736 DYNLL1P63167 89 aaKnown RBP27.59■■■□□ 2.01
COL9A2-201ENST00000372736 TTF1Q15361 905 aaPredicted RBP27.59■■■□□ 2.01
COL9A2-201ENST00000372736 OTUD7BQ6GQQ9 843 aa27.59■■■□□ 2.01
COL9A2-201ENST00000372736 TMED8Q6PL24 325 aaPredicted RBP27.59■■■□□ 2.01
COL9A2-201ENST00000372736 ABHD8Q96I13 439 aa27.59■■■□□ 2.01
COL9A2-201ENST00000372736 DNAJC2Q99543 621 aaKnown RBP27.59■■■□□ 2.01
COL9A2-201ENST00000372736 FLT1P17948 1338 aa27.59■■■□□ 2.01
COL9A2-201ENST00000372736 TBC1D12O60347 775 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 ATP5JP18859 108 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 DGKZQ13574 1117 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 SCYL3Q8IZE3 742 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 MIGA1Q8NAN2 632 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 TGFBRAP1Q8WUH2 860 aa27.58■■■□□ 2.01
COL9A2-201ENST00000372736 PHIPQ8WWQ0 1821 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 GOLIM4O00461 696 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 CETPP11597 493 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 CRHR2Q13324 411 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 SNAPC2Q13487 334 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 EDC3Q96F86 508 aaKnown RBP27.57■■■□□ 2
COL9A2-201ENST00000372736 KCNH4Q9UQ05 1017 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 ATAD5Q96QE3 1844 aa27.57■■■□□ 2
COL9A2-201ENST00000372736 FAM196BA6NMK8 535 aa27.56■■■□□ 2
COL9A2-201ENST00000372736 MAPKAPK5Q8IW41 473 aa27.56■■■□□ 2
COL9A2-201ENST00000372736 FAM43AQ8N2R8 423 aa27.56■■■□□ 2
COL9A2-201ENST00000372736 DDX60LQ5H9U9 1706 aaKnown RBP27.55■■■□□ 2
COL9A2-201ENST00000372736 PDE6AP16499 860 aa27.55■■■□□ 2
COL9A2-201ENST00000372736 CTU1Q7Z7A3 348 aaKnown RBP27.55■■■□□ 2
COL9A2-201ENST00000372736 BOLA2Q9H3K6 86 aa27.55■■■□□ 2
COL9A2-201ENST00000372736 PTPRFP10586 1907 aa27.55■■■□□ 2
COL9A2-201ENST00000372736 MYH1P12882 1939 aa27.55■■■□□ 2
COL9A2-201ENST00000372736 MYH7P12883 1935 aa27.55■■■□□ 2
COL9A2-201ENST00000372736 CTNND1O60716 968 aaKnown RBP27.54■■■□□ 2
COL9A2-201ENST00000372736 FKTNO75072 461 aa27.54■■■□□ 2
COL9A2-201ENST00000372736 CERS3Q8IU89 383 aa27.54■■■□□ 2
COL9A2-201ENST00000372736 HAUS7Q99871 368 aa27.54■■■□□ 2
COL9A2-201ENST00000372736 DHX36Q9H2U1 1008 aaKnown RBP27.54■■■□□ 2
COL9A2-201ENST00000372736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.54■■■□□ 2
COL9A2-201ENST00000372736 PAG1Q9NWQ8 432 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms