RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 R3HDMLQ9H3Y0 253 aa23.16■■□□□ 1.3
TMEM53-201ENST00000372235 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
TMEM53-201ENST00000372235 DDX19BQ9UMR2 479 aa23.16■■□□□ 1.3
TMEM53-201ENST00000372235 IRF6O14896 467 aa23.15■■□□□ 1.3
TMEM53-201ENST00000372235 PLCG2P16885 1265 aa23.15■■□□□ 1.3
TMEM53-201ENST00000372235 TMED8Q6PL24 325 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-201ENST00000372235 CNKSR2Q8WXI2 1034 aa23.15■■□□□ 1.3
TMEM53-201ENST00000372235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.15■■□□□ 1.3
TMEM53-201ENST00000372235 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
TMEM53-201ENST00000372235 HMMRO75330 724 aa23.14■■□□□ 1.29
TMEM53-201ENST00000372235 CEP85Q6P2H3 762 aa23.14■■□□□ 1.29
TMEM53-201ENST00000372235 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
TMEM53-201ENST00000372235 TRIM17Q9Y577 477 aa23.14■■□□□ 1.29
TMEM53-201ENST00000372235 RFX7Q2KHR2 1363 aa23.14■■□□□ 1.29
TMEM53-201ENST00000372235 TBC1D12O60347 775 aa23.13■■□□□ 1.29
TMEM53-201ENST00000372235 INPP5BP32019 993 aa23.13■■□□□ 1.29
TMEM53-201ENST00000372235 MAP3K10Q02779 954 aa23.13■■□□□ 1.29
TMEM53-201ENST00000372235 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
TMEM53-201ENST00000372235 RPAP2Q8IXW5 612 aaPredicted RBP23.13■■□□□ 1.29
TMEM53-201ENST00000372235 CXCL11O14625 94 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 PICALMQ13492 652 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 KIF22Q14807 665 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 NAA16Q6N069 864 aaPredicted RBP23.12■■□□□ 1.29
TMEM53-201ENST00000372235 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
TMEM53-201ENST00000372235 PANK1Q8TE04 598 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 EFCC1Q9HA90 598 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 KCNH4Q9UQ05 1017 aa23.12■■□□□ 1.29
TMEM53-201ENST00000372235 TLR2O60603 784 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 CTNND1O60716 968 aaKnown RBP23.11■■□□□ 1.29
TMEM53-201ENST00000372235 RHBDL3P58872 404 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 PI16Q6UXB8 463 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 TBC1D9Q6ZT07 1266 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 OTOP1Q7RTM1 612 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 ANKRD23Q86SG2 305 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 FAM43AQ8N2R8 423 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 RCAN3Q9UKA8 241 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 ATRNL1Q5VV63 1379 aa23.11■■□□□ 1.29
TMEM53-201ENST00000372235 COL2A1P02458 1487 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-201ENST00000372235 BTBD19C9JJ37 291 aa23.1■■□□□ 1.29
TMEM53-201ENST00000372235 GNRH1P01148 92 aa23.1■■□□□ 1.29
TMEM53-201ENST00000372235 FASTKD5Q7L8L6 764 aaKnown RBP23.1■■□□□ 1.29
TMEM53-201ENST00000372235 ZFPM1Q8IX07 1006 aa23.1■■□□□ 1.29
TMEM53-201ENST00000372235 DHX36Q9H2U1 1008 aaKnown RBP23.1■■□□□ 1.29
TMEM53-201ENST00000372235 PHF20L1A8MW92 1017 aa23.09■■□□□ 1.29
TMEM53-201ENST00000372235 CD99L2Q8TCZ2 262 aa23.09■■□□□ 1.29
TMEM53-201ENST00000372235 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
TMEM53-201ENST00000372235 DOCK2Q92608 1830 aa23.08■■□□□ 1.29
TMEM53-201ENST00000372235 DDTLA6NHG4 134 aaPredicted RBP23.08■■□□□ 1.29
TMEM53-201ENST00000372235 TEX11Q8IYF3 940 aa23.08■■□□□ 1.29
TMEM53-201ENST00000372235 ZNF384Q8TF68 577 aa23.08■■□□□ 1.29
TMEM53-201ENST00000372235 DDX4Q9NQI0 724 aaKnown RBP23.08■■□□□ 1.29
TMEM53-201ENST00000372235 DBNLQ9UJU6 430 aaKnown RBP23.08■■□□□ 1.29
TMEM53-201ENST00000372235 PTPN22Q9Y2R2 807 aa23.08■■□□□ 1.29
TMEM53-201ENST00000372235 PPP4CP60510 307 aa23.07■■□□□ 1.28
TMEM53-201ENST00000372235 EAF2Q96CJ1 260 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-201ENST00000372235 OSBPL5Q9H0X9 879 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-201ENST00000372235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.07■■□□□ 1.28
TMEM53-201ENST00000372235 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
TMEM53-201ENST00000372235 HERC5Q9UII4 1024 aaKnown RBP23.07■■□□□ 1.28
TMEM53-201ENST00000372235 CYP2E1P05181 493 aaPredicted RBP23.06■■□□□ 1.28
TMEM53-201ENST00000372235 PTPRAP18433 802 aa23.06■■□□□ 1.28
TMEM53-201ENST00000372235 PRMT2P55345 433 aa23.06■■□□□ 1.28
TMEM53-201ENST00000372235 SH3BP5LQ7L8J4 393 aa23.06■■□□□ 1.28
TMEM53-201ENST00000372235 CLASRPQ8N2M8 674 aaKnown RBP23.06■■□□□ 1.28
TMEM53-201ENST00000372235 PARK7Q99497 189 aaKnown RBP23.06■■□□□ 1.28
TMEM53-201ENST00000372235 CCDC8Q9H0W5 538 aaPredicted RBP23.06■■□□□ 1.28
TMEM53-201ENST00000372235 ZHX2Q9Y6X8 837 aa23.06■■□□□ 1.28
TMEM53-201ENST00000372235 PDHXO00330 501 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 RAB11FIP3O75154 756 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 SOX10P56693 466 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 PDE3AQ14432 1141 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 NBPF11Q86T75 865 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 AACSQ86V21 672 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 KIF1BPQ96EK5 621 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 ZBTB40Q9NUA8 1239 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 PI4KBQ9UBF8 816 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 EXOC6BQ9Y2D4 811 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 SLC45A1Q9Y2W3 748 aa23.05■■□□□ 1.28
TMEM53-201ENST00000372235 ZAP70P43403 619 aa23.04■■□□□ 1.28
TMEM53-201ENST00000372235 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
TMEM53-201ENST00000372235 TTF1Q15361 905 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-201ENST00000372235 AATFQ9NY61 560 aaKnown RBP eCLIP23.04■■□□□ 1.28
TMEM53-201ENST00000372235 COG6Q9Y2V7 657 aa23.04■■□□□ 1.28
TMEM53-201ENST00000372235 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
TMEM53-201ENST00000372235 A0A0G2JLL6 359 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-201ENST00000372235 PRRT2Q7Z6L0 340 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-201ENST00000372235 RHPN1Q8TCX5 695 aa23.03■■□□□ 1.28
TMEM53-201ENST00000372235 AFG3L2Q9Y4W6 797 aa23.03■■□□□ 1.28
TMEM53-201ENST00000372235 HOXD10P28358 340 aa23.02■■□□□ 1.28
TMEM53-201ENST00000372235 LACTBP83111 547 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-201ENST00000372235 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-201ENST00000372235 SH3RF3Q8TEJ3 882 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-201ENST00000372235 TRIM34Q9BYJ4 488 aa23.02■■□□□ 1.28
TMEM53-201ENST00000372235 IDH1O75874 414 aaKnown RBP23.01■■□□□ 1.27
TMEM53-201ENST00000372235 IFIT2P09913 472 aaKnown RBP23.01■■□□□ 1.27
TMEM53-201ENST00000372235 C17orf99Q6UX52 265 aa23.01■■□□□ 1.27
TMEM53-201ENST00000372235 GINM1Q9NU53 330 aa23.01■■□□□ 1.27
TMEM53-201ENST00000372235 HLA-DOAP06340 250 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms