RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 WDHD1O75717 1129 aaPredicted RBP19.97■□□□□ 0.79
CHTOP-203ENST00000368690 USP5P45974 858 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 RPS6KA5O75582 802 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 IVLP07476 585 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 ACTN2P35609 894 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 GNL2Q13823 731 aaKnown RBP19.97■□□□□ 0.79
CHTOP-203ENST00000368690 CTR9Q6PD62 1173 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
CHTOP-203ENST00000368690 TRERF1Q96PN7 1200 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 MYD88Q99836 296 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 INTS13Q9NVM9 706 aa19.97■□□□□ 0.79
CHTOP-203ENST00000368690 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
CHTOP-203ENST00000368690 MAST3O60307 1309 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 RNF113AO15541 343 aaKnown RBP19.96■□□□□ 0.79
CHTOP-203ENST00000368690 OTUD7BQ6GQQ9 843 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 CCDC34Q96HJ3 373 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 RAB21Q9UL25 225 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 HPS5Q9UPZ3 1129 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 ITGB4P16144 1822 aa19.96■□□□□ 0.79
CHTOP-203ENST00000368690 TMEM232C9JQI7 657 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 RESP18Q5W5W9 173 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 TC2NQ8N9U0 490 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 FANCLQ9NW38 375 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 C4AP0C0L4 1744 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 KIF28PB7ZC32 967 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 GOLIM4O00461 696 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 SPECC1LQ69YQ0 1117 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 SRLQ86TD4 932 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 EPC1Q9H2F5 836 aa19.95■□□□□ 0.78
CHTOP-203ENST00000368690 SHC4Q6S5L8 630 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 SRGAP1Q7Z6B7 1085 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.94■□□□□ 0.78
CHTOP-203ENST00000368690 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
CHTOP-203ENST00000368690 DOT1LQ8TEK3 1739 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 KCPQ6ZWJ8 1503 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 PTPAQ15257 358 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 HDXQ7Z353 690 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 CEP112Q8N8E3 955 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 MSANTD4Q8NCY6 345 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 DHX58Q96C10 678 aa19.94■□□□□ 0.78
CHTOP-203ENST00000368690 PAPPAQ13219 1627 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 H3BQF6 201 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 CPLX1O14810 134 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 CUTAO60888 179 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 ZNF18P17022 549 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 CCDC102BQ68D86 513 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 CHST3Q7LGC8 479 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 MB21D2Q8IYB1 491 aaPredicted RBP19.93■□□□□ 0.78
CHTOP-203ENST00000368690 HOOK1Q9UJC3 728 aaKnown RBP19.93■□□□□ 0.78
CHTOP-203ENST00000368690 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 BCL9O00512 1426 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 GOLGA8BA8MQT2 603 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 EIF3JO75822 258 aaKnown RBP19.93■□□□□ 0.78
CHTOP-203ENST00000368690 TUBBP07437 444 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 LMAN1P49257 510 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 PNOCQ13519 176 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 LEKR1Q6ZMV7 388 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 ANKRD13DQ6ZTN6 518 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 TOGARAM2Q6ZUX3 1019 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 METTL16Q86W50 562 aaKnown RBP19.93■□□□□ 0.78
CHTOP-203ENST00000368690 DACH1Q9UI36 760 aa19.93■□□□□ 0.78
CHTOP-203ENST00000368690 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
CHTOP-203ENST00000368690 ERLIN1O75477 346 aa19.92■□□□□ 0.78
CHTOP-203ENST00000368690 CHMP4BP1P59074 171 aa19.92■□□□□ 0.78
CHTOP-203ENST00000368690 IMMTQ16891 758 aaKnown RBP19.92■□□□□ 0.78
CHTOP-203ENST00000368690 BEND6Q5SZJ8 279 aaPredicted RBP19.92■□□□□ 0.78
CHTOP-203ENST00000368690 ISM2Q6H9L7 571 aa19.92■□□□□ 0.78
CHTOP-203ENST00000368690 FAM177A1Q8N128 213 aaPredicted RBP19.92■□□□□ 0.78
CHTOP-203ENST00000368690 ENOX1Q8TC92 643 aaKnown RBP19.92■□□□□ 0.78
CHTOP-203ENST00000368690 PANX2Q96RD6 677 aa19.92■□□□□ 0.78
CHTOP-203ENST00000368690 NAA15Q9BXJ9 866 aaKnown RBP19.92■□□□□ 0.78
CHTOP-203ENST00000368690 PRC1O43663 620 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 TNNT3P45378 269 aaPredicted RBP19.91■□□□□ 0.78
CHTOP-203ENST00000368690 GOLGA8FQ08AF8 430 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 GOLGA8DPQ0D2H9 430 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 RRP15Q9Y3B9 282 aaKnown RBP19.91■□□□□ 0.78
CHTOP-203ENST00000368690 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
CHTOP-203ENST00000368690 CCDC175P0C221 793 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 MARCKSP29966 332 aaPredicted RBP19.91■□□□□ 0.78
CHTOP-203ENST00000368690 CASP7P55210 303 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 LRP10Q7Z4F1 713 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 MLKLQ8NB16 471 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 CCDC12Q8WUD4 166 aaPredicted RBP19.91■□□□□ 0.78
CHTOP-203ENST00000368690 MAP3K14Q99558 947 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 RSPH14Q9UHP6 348 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 GLI3P10071 1580 aa19.91■□□□□ 0.78
CHTOP-203ENST00000368690 LAMB4A4D0S4 1761 aa19.9■□□□□ 0.78
CHTOP-203ENST00000368690 ARFGEF2Q9Y6D5 1785 aa19.9■□□□□ 0.78
CHTOP-203ENST00000368690 NOM1Q5C9Z4 860 aaKnown RBP19.9■□□□□ 0.78
CHTOP-203ENST00000368690 NT5DC1Q5TFE4 455 aa19.9■□□□□ 0.78
CHTOP-203ENST00000368690 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
CHTOP-203ENST00000368690 CDC23Q9UJX2 597 aa19.9■□□□□ 0.78
CHTOP-203ENST00000368690 PCDHA5Q9Y5H7 936 aa19.9■□□□□ 0.78
CHTOP-203ENST00000368690 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms