RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
LMNA-203ENST00000368297 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
LMNA-203ENST00000368297 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
LMNA-203ENST00000368297 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 K7ELQ4 463 aaPredicted RBP18.83■□□□□ 0.61
LMNA-203ENST00000368297 HMGB1P09429 215 aaKnown RBP18.83■□□□□ 0.61
LMNA-203ENST00000368297 RPS6KB1P23443 525 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.61
LMNA-203ENST00000368297 TRDNQ13061 729 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 PICALMQ13492 652 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 DLGAP5Q15398 846 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 STK11IPQ8N1F8 1099 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 NBPF3Q9H094 633 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.61
LMNA-203ENST00000368297 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 FOCADQ5VW36 1801 aa18.83■□□□□ 0.61
LMNA-203ENST00000368297 FLT1P17948 1338 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 POLR3DP05423 398 aaPredicted RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 SLC4A8Q2Y0W8 1093 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 NCOA7Q8NI08 942 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 CYP2D6P10635 497 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 GMPSP49915 693 aaPredicted RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 AKNAD1Q5T1N1 836 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 MFSD6Q6ZSS7 791 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 NOL8Q76FK4 1167 aaKnown RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 SLKQ9H2G2 1235 aaPredicted RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 RNF41Q9H4P4 317 aaPredicted RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 TOMM22Q9NS69 142 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 MKRN1Q9UHC7 482 aaKnown RBP18.82■□□□□ 0.6
LMNA-203ENST00000368297 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
LMNA-203ENST00000368297 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
LMNA-203ENST00000368297 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
LMNA-203ENST00000368297 TCEANC2Q96MN5 208 aa18.81■□□□□ 0.6
LMNA-203ENST00000368297 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
LMNA-203ENST00000368297 MYH1P12882 1939 aa18.81■□□□□ 0.6
LMNA-203ENST00000368297 WDHD1O75717 1129 aaPredicted RBP18.8■□□□□ 0.6
LMNA-203ENST00000368297 MCM2P49736 904 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 RRP12Q5JTH9 1297 aaKnown RBP18.8■□□□□ 0.6
LMNA-203ENST00000368297 C9orf131Q5VYM1 1079 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 DHX32Q7L7V1 743 aaKnown RBP18.8■□□□□ 0.6
LMNA-203ENST00000368297 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 PRMT6Q96LA8 375 aaPredicted RBP18.8■□□□□ 0.6
LMNA-203ENST00000368297 TTC14Q96N46 770 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 TMOD2Q9NZR1 351 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 NEDD4P46934 1319 aa18.8■□□□□ 0.6
LMNA-203ENST00000368297 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 MMP14P50281 582 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 AK2P54819 239 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 FGD1P98174 961 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 COL9A3Q14050 684 aaPredicted RBP18.79■□□□□ 0.6
LMNA-203ENST00000368297 C12orf60Q5U649 245 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 KRT23Q9C075 422 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 INCENPQ9NQS7 918 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 DDX60LQ5H9U9 1706 aaKnown RBP18.79■□□□□ 0.6
LMNA-203ENST00000368297 B4E1Z4 1266 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 CACNB3P54284 484 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 DPF2Q92785 391 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 MYOZ2Q9NPC6 264 aa18.79■□□□□ 0.6
LMNA-203ENST00000368297 DDX4Q9NQI0 724 aaKnown RBP18.79■□□□□ 0.6
LMNA-203ENST00000368297 SHTN1A0MZ66 631 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 MCM5P33992 734 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 EVX2Q03828 476 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 NBR1Q14596 966 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 MICALL2Q8IY33 904 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
LMNA-203ENST00000368297 GPC2Q8N158 579 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 MTMR14Q8NCE2 650 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
LMNA-203ENST00000368297 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
LMNA-203ENST00000368297 ZNF280AP59817 542 aaPredicted RBP18.77■□□□□ 0.6
LMNA-203ENST00000368297 NFIAQ12857 509 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 ANKRD1Q15327 319 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 RBM26Q5T8P6 1007 aaKnown RBP18.77■□□□□ 0.6
LMNA-203ENST00000368297 Q6ZUG5 572 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 OSBPL5Q9H0X9 879 aaPredicted RBP18.77■□□□□ 0.6
LMNA-203ENST00000368297 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
LMNA-203ENST00000368297 CLRN2A0PK11 232 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 PRC1O43663 620 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 MYO1BO43795 1136 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 PCP11498 1178 aaKnown RBP18.76■□□□□ 0.59
LMNA-203ENST00000368297 EXOSC10Q01780 885 aaKnown RBP18.76■□□□□ 0.59
LMNA-203ENST00000368297 PDE4BQ07343 736 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 TCP10Q12799 353 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
LMNA-203ENST00000368297 IDI2Q9BXS1 227 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 ZNF70Q9UC06 446 aaPredicted RBP18.76■□□□□ 0.59
LMNA-203ENST00000368297 H7C1D1 291 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 KDM4AO75164 1064 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 PLCD1P51178 756 aa18.76■□□□□ 0.59
LMNA-203ENST00000368297 TTC6Q86TZ1 520 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms