RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RHBDD1Q8TEB9 315 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 BRINP2Q9C0B6 783 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CCNL1Q9UK58 526 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 PIEZO1Q92508 2521 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CLTCL1P53675 1640 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 KNDC1Q76NI1 1749 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 TMEM265A0A087WTH1 108 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 SPATA31C2B4DYI2 1134 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 EXOC5O00471 708 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PPFIA4O75335 1185 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 LIG1P18858 919 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 ATP2B4P23634 1241 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PSMA6P60900 246 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 EAPPQ56P03 285 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 WDR78Q5VTH9 848 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 LYSMD3Q7Z3D4 306 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PPARGC1BQ86YN6 1023 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 GIPC2Q8TF65 315 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 LAMB4A4D0S4 1761 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 COL18A1P39060 1754 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 KAT6BQ8WYB5 2073 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 CEP162Q5TB80 1403 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 SBF1O95248 1867 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PIK3C2AO00443 1686 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 GPRASP1Q5JY77 1395 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PPP1R12BO60237 982 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 MMP10P09238 476 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 CALRP27797 417 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 PTPROQ16827 1216 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 TMEM132EQ6IEE7 984 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 KRBA2Q6ZNG9 492 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 FAM9BQ8IZU0 186 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 SCG3Q8WXD2 468 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 KCNB2Q92953 911 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 COL26A1Q96A83 441 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 SYTL4Q96C24 671 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 MTA3Q9BTC8 594 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 NIFKQ9BYG3 293 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 TSPAN10Q9H1Z9 355 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 CABP1Q9NZU7 370 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 CXXC1Q9P0U4 656 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 KLHL42Q9P2K6 505 aa4.53□□□□□ -1.68
ECHDC1-205ENST00000368295 TRPM1Q7Z4N2 1603 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 IQGAP3Q86VI3 1631 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 SH3BP5O60239 455 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 MAN1A2O60476 641 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 PRMT3O60678 531 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 DDNO94850 711 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 WEE1P30291 646 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 CHRNA5P30532 468 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 RBM10P98175 930 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 MAP3K10Q02779 954 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 TEAD4Q15561 434 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 ZFYVE27Q5T4F4 411 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 TAS1R3Q7RTX0 852 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 STAG2Q8N3U4 1231 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 VTI1AQ96AJ9 217 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 PRIMPOLQ96LW4 560 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 JADE2Q9NQC1 790 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 ENAMQ9NRM1 1142 aa4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 IQSEC3Q9UPP2 1182 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-205ENST00000368295 FIGNL2A6NMB9 653 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 PLA2G4AP47712 749 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 WDR44Q5JSH3 913 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 EGFLAMQ63HQ2 1017 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 NBPF10Q6P3W6 841 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 GPR161Q8N6U8 529 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 ZCRB1Q8TBF4 217 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 PNISRQ8TF01 805 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 WHAMMQ8TF30 809 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 MAF1Q9H063 256 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 DNMT3LQ9UJW3 386 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 FAN1Q9Y2M0 1017 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 USP3Q9Y6I4 520 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 CENPFP49454 3210 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 SERTM1A2A2V5 107 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 LGR5O75473 907 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 PARNO95453 639 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 TGFB2P61812 414 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 MAP3K12Q12852 859 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 MYBPC2Q14324 1141 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 OCLNQ16625 522 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 C4orf17Q53FE4 359 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 DALRD3Q5D0E6 543 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 TBCELQ5QJ74 424 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 SDE2Q6IQ49 451 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 PRICKLE2Q7Z3G6 844 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 ALYREFQ86V81 257 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 LDHDQ86WU2 507 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 NPAS4Q8IUM7 802 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 C1orf216Q8TAB5 229 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 GPATCH3Q96I76 525 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 WNK3Q9BYP7 1800 aa4.51□□□□□ -1.69
ECHDC1-205ENST00000368295 E9PCH4 1651 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 USP54Q70EL1 1684 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 CARNS1A5YM72 827 aa4.5□□□□□ -1.69
ECHDC1-205ENST00000368295 KDM6AO15550 1401 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms