RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TDO2P48775 406 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 FKBP1AP62942 108 aaKnown RBP14.26□□□□□ -0.13
USF1-203ENST00000368021 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
USF1-203ENST00000368021 GRIK5Q16478 980 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 EAPPQ56P03 285 aaPredicted RBP14.26□□□□□ -0.13
USF1-203ENST00000368021 NCOA7Q8NI08 942 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 L3MBTL3Q96JM7 780 aaPredicted RBP14.26□□□□□ -0.13
USF1-203ENST00000368021 AGXT2Q9BYV1 514 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 ATP8A2Q9NTI2 1148 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 HACL1Q9UJ83 578 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 IQCA1LA6NCM1 817 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 LMOD1P29536 600 aaPredicted RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 TRDNQ13061 729 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 TOB2Q14106 344 aaPredicted RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 SDR42E1Q8WUS8 393 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 SCN9AQ15858 1988 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 GAKO14976 1311 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 USP17L3A6NCW0 530 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 USP17L4A6NCW7 530 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 DIXDC1Q155Q3 683 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 STRIP1Q5VSL9 837 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 USP17L1Q7RTZ2 530 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 NOL10Q9BSC4 688 aaKnown RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
USF1-203ENST00000368021 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
USF1-203ENST00000368021 GPR75-ASB3A0A0A6YYF3 556 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 TOMM70O94826 608 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
USF1-203ENST00000368021 MCM5P33992 734 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 EPHX2P34913 555 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 MB21D2Q8IYB1 491 aaPredicted RBP14.24□□□□□ -0.13
USF1-203ENST00000368021 STAG1Q8WVM7 1258 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 TCEANC2Q96MN5 208 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
USF1-203ENST00000368021 CNOT7Q9UIV1 285 aaKnown RBP14.24□□□□□ -0.13
USF1-203ENST00000368021 VIL1P09327 827 aaKnown RBP14.23□□□□□ -0.13
USF1-203ENST00000368021 PLCG2P16885 1265 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
USF1-203ENST00000368021 Q6ZUG5 572 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 MICALL2Q8IY33 904 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 CERS5Q8N5B7 392 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
USF1-203ENST00000368021 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 DCP1AQ9NPI6 582 aaPredicted RBP14.23□□□□□ -0.13
USF1-203ENST00000368021 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
USF1-203ENST00000368021 PCP11498 1178 aaKnown RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 PPARAQ07869 468 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 ZNF646O15015 1829 aaPredicted RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 WDR90Q96KV7 1748 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 FGD1P98174 961 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 ME3Q16798 604 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 SBK1Q52WX2 424 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 RSBN1LQ6PCB5 846 aaPredicted RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 MFSD6Q6ZSS7 791 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 SAMD7Q7Z3H4 446 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 MRIQ9BWK5 157 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 KRT23Q9C075 422 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
USF1-203ENST00000368021 ARPP21Q9UBL0 812 aaPredicted RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.22□□□□□ -0.13
USF1-203ENST00000368021 EGFRP00533 1210 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 BTDP43251 543 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 EVCP57679 992 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 C1QTNF8P60827 252 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 DACT2Q5SW24 774 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 CTR9Q6PD62 1173 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 PSME4Q14997 1843 aa14.21□□□□□ -0.13
USF1-203ENST00000368021 NEDD4P46934 1319 aa14.21□□□□□ -0.14
USF1-203ENST00000368021 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 H7C1D1 291 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 PRC1O43663 620 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 LARGE1O95461 756 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 FGRP09769 529 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 TBC1D10BQ4KMP7 808 aaPredicted RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 SH3RF3Q8TEJ3 882 aaPredicted RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 BRF1Q92994 677 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 MTA3Q9BTC8 594 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 TTF2Q9UNY4 1162 aaKnown RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 LAMB1P07942 1786 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 USP17L12C9JPN9 530 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 USP17L21D6R901 530 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 NT5C2P49902 561 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 ANTXR2P58335 489 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 RHBDL3P58872 404 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 HDLBPQ00341 1268 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms