RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■■□□ 19
CDC42BPA-202ENST00000366764 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 USP6P35125 1406 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 DMTNQ08495 405 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 COPRSQ9NQ92 184 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 RTEL1Q9NZ71 1219 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 CEP128Q6ZU80 1094 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 RABGGTAQ92696 567 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 XPO4Q9C0E2 1151 aaKnown RBP13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 IL2RBP14784 551 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 BICDL1Q6ZP65 573 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC77Q9BR77 488 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 NEURL1BA8MQ27 555 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 CFAP58Q5T655 872 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
CDC42BPA-202ENST00000366764 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 WWC3Q9ULE0 1092 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.285e-7■■■□□ 18.6
CDC42BPA-202ENST00000366764 UBA5Q9GZZ9 404 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 STK24Q9Y6E0 443 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 POLR2DO15514 142 aaKnown RBP13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 TCERG1LQ5VWI1 586 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 IKBKBO14920 756 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 MAGEB6Q8N7X4 407 aa13.27□□□□□ -0.28
CDC42BPA-202ENST00000366764 PHLPP2Q6ZVD8 1323 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 ARHGAP25P42331 645 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 PAK1Q13153 545 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 SPATS2Q86XZ4 545 aaKnown RBP13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 E7EWF7 191 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 NAPAP54920 295 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 TTC6Q86TZ1 520 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 IFT20Q8IY31 132 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.29
CDC42BPA-202ENST00000366764 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 JAKMIP2Q96AA8 810 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 MRVI1Q9Y6F6 885 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 STX10O60499 249 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 NF2P35240 595 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 BCCIPQ9P287 314 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 PPFIA3O75145 1194 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 RHOXF2BP0C7M4 288 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 KRT40Q6A162 431 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 FBXO18Q8NFZ0 1043 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 HSP90AA4PQ58FG1 418 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-202ENST00000366764 DLC1Q96QB1 1528 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 MSL1Q68DK7 614 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 NOX5Q96PH1 765 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 IQSEC3Q9UPP2 1182 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 JAK2O60674 1132 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 MAGEF1Q9HAY2 307 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■■□ 22.8
CDC42BPA-202ENST00000366764 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 ATRIPQ8WXE1 791 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms