RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 RPGRIP1Q96KN7 1286 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 SERTAD1Q9UHV2 236 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 PCDHA5Q9Y5H7 936 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 VWA3AA6NCI4 1184 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 TBC1D8BQ0IIM8 1120 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 E2F4Q16254 413 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 DSCC1Q9BVC3 393 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 RAB34Q9BZG1 259 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 B4E1Z4 1266 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 RGS22Q8NE09 1264 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 ATP1A3P13637 1013 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 TSGA10Q9BZW7 698 aa17.99■□□□□ 0.47
CLSTN1-201ENST00000361311 CLNS1AP54105 237 aaKnown RBP17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 ASIC1P78348 528 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 IFI16Q16666 785 aaKnown RBP17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 SELENOOQ9BVL4 669 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 A0A087WUV0 522 aaPredicted RBP17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 HOXC9P31274 260 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 CAPS2Q9BXY5 557 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 SAMD9LQ8IVG5 1584 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 SLC35F6Q8N357 371 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 ESR2Q92731 530 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 NSRP1Q9H0G5 558 aaKnown RBP17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 LGR6Q9HBX8 967 aa17.98■□□□□ 0.47
CLSTN1-201ENST00000361311 ANKRD65E5RJM6 399 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 CYP21A2P08686 494 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 KRT2P35908 639 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 RNF40O75150 1001 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 LINC00301Q8NCQ3 95 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 CABS1Q96KC9 395 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 TAOK3Q9H2K8 898 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 GPTP24298 496 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 MAGEA9P43362 315 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 TNNC1P63316 161 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 SECISBP2LQ93073 1101 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 UQCRFS1P1P0C7P4 283 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 KIF5BP33176 963 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 BANK1Q8NDB2 785 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 PSMB7Q99436 277 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 PLEKHA4Q9H4M7 779 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 ADCY9O60503 1353 aa17.97■□□□□ 0.47
CLSTN1-201ENST00000361311 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 USP5P45974 858 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 PAK1Q13153 545 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 ZNF174Q15697 407 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 CCDC155Q8N6L0 562 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 SBNO1A3KN83 1393 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 VSTM4Q8IW00 320 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 EPC1Q9H2F5 836 aa17.96■□□□□ 0.47
CLSTN1-201ENST00000361311 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.46
CLSTN1-201ENST00000361311 ARID5AQ03989 594 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 SELENOSQ9BQE4 189 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 SEC63Q9UGP8 760 aaKnown RBP17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 SLC4A4Q9Y6R1 1079 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 TLDC2A0PJX2 215 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 BICDL2A1A5D9 508 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 TCERG1LQ5VWI1 586 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 IFT20Q8IY31 132 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 STAMQ92783 540 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 MYL10Q9BUA6 226 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 POLR3EQ9NVU0 708 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 PPP1R12BO60237 982 aaPredicted RBP17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 MCM7P33993 719 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 PPARDQ03181 441 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 CASP8Q14790 479 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 KIAA0753Q2KHM9 967 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 ANKRD62A6NC57 917 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 STARD3NLO95772 234 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 APPBP2Q92624 585 aa17.95■□□□□ 0.46
CLSTN1-201ENST00000361311 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 ABCB6Q9NP58 842 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 UBA5Q9GZZ9 404 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 GPAA1O43292 621 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms