RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CEP57Q86XR8 500 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 DZIP3Q86Y13 1208 aaKnown RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 TMEM106CQ9BVX2 250 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 SLC4A7Q9Y6M7 1214 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 HEXIM1O94992 359 aaKnown RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ELF1P32519 619 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 RAD51AP2Q09MP3 1159 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 CALCOCO2Q13137 446 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 KRT79Q5XKE5 535 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 TRIM50Q86XT4 487 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 STMN2Q93045 179 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 RAD18Q9NS91 495 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 TSR3Q9UJK0 312 aaKnown RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 TESPA1A2RU30 521 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 KRT3P12035 628 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 DPP8Q6V1X1 898 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 DOLKQ9UPQ8 538 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ATF5Q9Y2D1 282 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 NBPF7P0C2Y1 421 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 LRMPQ12912 555 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 DCUN1D2Q6PH85 259 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 AFAP1L1Q8TED9 768 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 NEUROG2Q9H2A3 272 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 CCDC68Q9H2F9 335 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 SLC12A5Q9H2X9 1139 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.47□□□□□ -1.37
BRCA1-203ENST00000357654 NEMP1O14524 444 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ESRRBO95718 433 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ANXA1P04083 346 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 RXRAP19793 462 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ARL4DP49703 201 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 ARHGEF16Q5VV41 709 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 CETN3O15182 167 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 RTN1Q16799 776 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 FAM98CQ17RN3 349 aaKnown RBP6.46□□□□□ -1.37
BRCA1-203ENST00000357654 RILPL1Q5EBL4 403 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 CC2D2BQ6DHV5 1058 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 CNBD1Q8NA66 436 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 PDZD8Q8NEN9 1154 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 NCOA7Q8NI08 942 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 AP5M1Q9H0R1 490 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 ORC3Q9UBD5 711 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-203ENST00000357654 FIS1Q9Y3D6 152 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 RAB11FIP3O75154 756 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 ATP6V1E2Q96A05 226 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 NOX5Q96PH1 765 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 SUGCTQ9HAC7 445 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 ADAMTS8Q9UP79 889 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 SLC8A2Q9UPR5 921 aa6.46□□□□□ -1.37
BRCA1-203ENST00000357654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.46□□□□□ -1.37
BRCA1-203ENST00000357654 UBN2Q6ZU65 1347 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 ZEB2O60315 1214 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 MX2P20592 715 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 HSPA2P54652 639 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 STX17P56962 302 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 TRIM14Q14142 442 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 NEK11Q8NG66 645 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 KIF1BPQ96EK5 621 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 COG4Q9H9E3 785 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 SLC13A4Q9UKG4 626 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 DAAM1Q9Y4D1 1078 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 PARP1P09874 1014 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 PUM3Q15397 648 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 PPP4R3BQ5MIZ7 849 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 FAM102BQ5T8I3 360 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 USP48Q86UV5 1035 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 ELMOD1Q8N336 334 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 NUDT16Q96DE0 195 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 LZTFL1Q9NQ48 299 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 RMND1Q9NWS8 449 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 MYO1AQ9UBC5 1043 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 BAG5Q9UL15 447 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 LRPPRCP42704 1394 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 GLRX3O76003 335 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 BRD2P25440 801 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 TSHZ3Q63HK5 1081 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 TEX11Q8IYF3 940 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 PPP4R1Q8TF05 950 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 MAGEB10Q96LZ2 347 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 LBHD1Q9BQE6 289 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 ARHGAP5Q13017 1502 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 CTAGE5O15320 804 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 N4BP1O75113 896 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 MAP7Q14244 749 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 LIN9Q5TKA1 542 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 SUCLA2Q9P2R7 463 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 IPO11Q9UI26 975 aaKnown RBP6.46□□□□□ -1.38
BRCA1-203ENST00000357654 NUB1Q9Y5A7 615 aa6.46□□□□□ -1.38
BRCA1-203ENST00000357654 MSH6P52701 1360 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 CFBP00751 764 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 IVLP07476 585 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 EPB41P11171 864 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 ANKRD24Q8TF21 1146 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 KLF18A0A0U1RQI7 1052 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms