RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IDI2Q9BXS1 227 aa30.38■■■□□ 2.45
SSBP3-202ENST00000357475 SAP30BPQ9UHR5 308 aaKnown RBP30.38■■■□□ 2.45
SSBP3-202ENST00000357475 SMIM22K7EJ46 135 aa30.37■■■□□ 2.45
SSBP3-202ENST00000357475 VEGFAP15692 232 aaPredicted RBP30.37■■■□□ 2.45
SSBP3-202ENST00000357475 KIAA1211Q6ZU35 1233 aa30.37■■■□□ 2.45
SSBP3-202ENST00000357475 DSCC1Q9BVC3 393 aa30.37■■■□□ 2.45
SSBP3-202ENST00000357475 LAMB1P07942 1786 aa30.36■■■□□ 2.45
SSBP3-202ENST00000357475 FGAP02671 866 aa30.36■■■□□ 2.45
SSBP3-202ENST00000357475 ATP8A2Q9NTI2 1148 aa30.36■■■□□ 2.45
SSBP3-202ENST00000357475 TMOD2Q9NZR1 351 aa30.36■■■□□ 2.45
SSBP3-202ENST00000357475 CYP2D7A0A087X1C5 515 aa30.35■■■□□ 2.45
SSBP3-202ENST00000357475 CYP2D6P10635 497 aa30.35■■■□□ 2.45
SSBP3-202ENST00000357475 CDAN1Q8IWY9 1227 aa30.35■■■□□ 2.45
SSBP3-202ENST00000357475 MAP4K1Q92918 833 aa30.35■■■□□ 2.45
SSBP3-202ENST00000357475 SIPA1L1O43166 1804 aa30.34■■■□□ 2.45
SSBP3-202ENST00000357475 SH3BP5LQ7L8J4 393 aa30.34■■■□□ 2.45
SSBP3-202ENST00000357475 OSBPL5Q9H0X9 879 aaPredicted RBP30.34■■■□□ 2.45
SSBP3-202ENST00000357475 RBM8AQ9Y5S9 174 aaKnown RBP30.34■■■□□ 2.45
SSBP3-202ENST00000357475 LAMA4Q16363 1823 aa30.34■■■□□ 2.45
SSBP3-202ENST00000357475 REC8O95072 547 aa30.33■■■□□ 2.45
SSBP3-202ENST00000357475 TDO2P48775 406 aa30.33■■■□□ 2.45
SSBP3-202ENST00000357475 DLK2Q6UY11 383 aa30.33■■■□□ 2.45
SSBP3-202ENST00000357475 PALD1Q9ULE6 856 aa30.33■■■□□ 2.45
SSBP3-202ENST00000357475 RPAP1Q9BWH6 1393 aaPredicted RBP30.33■■■□□ 2.45
SSBP3-202ENST00000357475 CTR9Q6PD62 1173 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 USP26Q9BXU7 913 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 TMEM39BQ9GZU3 492 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 NAPBQ9H115 298 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 MCM9Q9NXL9 1143 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 USP17L12C9JPN9 530 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 USP17L21D6R901 530 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 ALX1Q15699 326 aa30.32■■■□□ 2.44
SSBP3-202ENST00000357475 PNMA8AQ86V59 439 aaPredicted RBP30.32■■■□□ 2.44
SSBP3-202ENST00000357475 DDTLA6NHG4 134 aaPredicted RBP30.31■■■□□ 2.44
SSBP3-202ENST00000357475 ENTPD3O75355 529 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 SLURP2P0DP57 97 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 RASA3Q14644 834 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 FKBP1CQ5VVH2 108 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 GIMAP6Q6P9H5 292 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 NACAP1Q9BZK3 213 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 PGAP2Q9UHJ9 254 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 TAF6LQ9Y6J9 622 aa30.31■■■□□ 2.44
SSBP3-202ENST00000357475 NPM3O75607 178 aaKnown RBP30.3■■■□□ 2.44
SSBP3-202ENST00000357475 HAND2P61296 217 aa30.3■■■□□ 2.44
SSBP3-202ENST00000357475 ADM5C9JUS6 153 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 PLCD1P51178 756 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 PRAMEF18Q5VWM3 479 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 APOBEC3FQ8IUX4 373 aaKnown RBP30.29■■■□□ 2.44
SSBP3-202ENST00000357475 FAM151AQ8WW52 585 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 DEFB129Q9H1M3 183 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 GPBP1L1Q9HC44 474 aaPredicted RBP30.29■■■□□ 2.44
SSBP3-202ENST00000357475 CLEC11AQ9Y240 323 aa30.29■■■□□ 2.44
SSBP3-202ENST00000357475 U3KPZ7 1027 aaPredicted RBP30.29■■■□□ 2.44
SSBP3-202ENST00000357475 YY1P25490 414 aa30.28■■■□□ 2.44
SSBP3-202ENST00000357475 FAM83AQ86UY5 434 aa30.28■■■□□ 2.44
SSBP3-202ENST00000357475 ZC3H15Q8WU90 426 aaKnown RBP30.28■■■□□ 2.44
SSBP3-202ENST00000357475 PITPNM2Q9BZ72 1349 aa30.28■■■□□ 2.44
SSBP3-202ENST00000357475 MINDY4BA8MYZ0 360 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 ZMYM6O95789 1325 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 NECTIN1Q15223 517 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 STK11IPQ8N1F8 1099 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 TEPSINQ96N21 525 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 NBPF3Q9H094 633 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 ZSCAN29Q8IWY8 852 aaPredicted RBP30.27■■■□□ 2.44
SSBP3-202ENST00000357475 DCPSQ96C86 337 aaKnown RBP30.27■■■□□ 2.44
SSBP3-202ENST00000357475 DDRGK1Q96HY6 314 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 TACC3Q9Y6A5 838 aa30.27■■■□□ 2.44
SSBP3-202ENST00000357475 ATRNL1Q5VV63 1379 aa30.26■■■□□ 2.43
SSBP3-202ENST00000357475 POLR3DP05423 398 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-202ENST00000357475 CYP21A2P08686 494 aa30.26■■■□□ 2.43
SSBP3-202ENST00000357475 SBK1Q52WX2 424 aa30.26■■■□□ 2.43
SSBP3-202ENST00000357475 C12orf60Q5U649 245 aa30.26■■■□□ 2.43
SSBP3-202ENST00000357475 MAP1SQ66K74 1059 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-202ENST00000357475 COL2A1P02458 1487 aaPredicted RBP30.25■■■□□ 2.43
SSBP3-202ENST00000357475 TNNI2P48788 182 aa30.25■■■□□ 2.43
SSBP3-202ENST00000357475 CTDSPL2Q05D32 466 aa30.25■■■□□ 2.43
SSBP3-202ENST00000357475 TNFAIP1Q13829 316 aa30.25■■■□□ 2.43
SSBP3-202ENST00000357475 GLIS2Q9BZE0 524 aaPredicted RBP30.25■■■□□ 2.43
SSBP3-202ENST00000357475 ARPP21Q9UBL0 812 aaPredicted RBP30.25■■■□□ 2.43
SSBP3-202ENST00000357475 SLC27A2O14975 620 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 PPARAQ07869 468 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 CREB3L3Q68CJ9 461 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 KRT26Q7Z3Y9 468 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 USP48Q86UV5 1035 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 DYNLL2Q96FJ2 89 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 INCENPQ9NQS7 918 aa30.24■■■□□ 2.43
SSBP3-202ENST00000357475 KIF3CO14782 793 aa30.23■■■□□ 2.43
SSBP3-202ENST00000357475 LDHDQ86WU2 507 aa30.23■■■□□ 2.43
SSBP3-202ENST00000357475 TBC1D10CQ8IV04 446 aa30.23■■■□□ 2.43
SSBP3-202ENST00000357475 RASEFQ8IZ41 740 aa30.23■■■□□ 2.43
SSBP3-202ENST00000357475 CTNNA3Q9UI47 895 aa30.23■■■□□ 2.43
SSBP3-202ENST00000357475 FAM196BA6NMK8 535 aa30.22■■■□□ 2.43
SSBP3-202ENST00000357475 HSPA4P34932 840 aa30.22■■■□□ 2.43
SSBP3-202ENST00000357475 NBPF12Q5TAG4 269 aaPredicted RBP30.22■■■□□ 2.43
SSBP3-202ENST00000357475 SULF1Q8IWU6 871 aa30.22■■■□□ 2.43
SSBP3-202ENST00000357475 CSRNP1Q96S65 589 aa30.22■■■□□ 2.43
SSBP3-202ENST00000357475 SLC44A5Q8NCS7 719 aa30.22■■■□□ 2.43
SSBP3-202ENST00000357475 SSC5DA1L4H1 1573 aa30.21■■■□□ 2.43
SSBP3-202ENST00000357475 ZNF213O14771 459 aa30.21■■■□□ 2.43
SSBP3-202ENST00000357475 FMR1Q06787 632 aaKnown RBP eCLIP30.21■■■□□ 2.439e-6■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms